RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 LONRF3Q496Y0 759 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 MORC2Q9Y6X9 1032 aaPredicted RBP25.03■■□□□ 1.6
LIMS2-202ENST00000355119 CYP2D7A0A087X1C5 515 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 GNPATO15228 680 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 ORC4O43929 436 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 DDAH1O94760 285 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 SMC2O95347 1197 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 KLRK1P26718 216 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 OLFM4Q6UX06 510 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 METTL16Q86W50 562 aaKnown RBP25.03■■□□□ 1.6
LIMS2-202ENST00000355119 C8orf37Q96NL8 207 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 IFNKQ9P0W0 207 aa25.03■■□□□ 1.6
LIMS2-202ENST00000355119 BTAF1O14981 1849 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 SKILP12757 684 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 TPD52L1Q16890 204 aaPredicted RBP25.02■■□□□ 1.6
LIMS2-202ENST00000355119 SMIM5Q71RC9 77 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 XPO4Q9C0E2 1151 aaKnown RBP25.02■■□□□ 1.6
LIMS2-202ENST00000355119 ATP8A2Q9NTI2 1148 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.02■■□□□ 1.6
LIMS2-202ENST00000355119 BAZ2AQ9UIF9 1905 aaKnown RBP25.02■■□□□ 1.6
LIMS2-202ENST00000355119 USP17L12C9JPN9 530 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 USP17L21D6R901 530 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 SMIM22K7EJ46 135 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 MYO1BO43795 1136 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 FUT2Q10981 343 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 NR5A1Q13285 461 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 ARID5BQ14865 1188 aa25.02■■□□□ 1.6
LIMS2-202ENST00000355119 RTCBQ9Y3I0 505 aaKnown RBP25.02■■□□□ 1.6
LIMS2-202ENST00000355119 SRPRBQ9Y5M8 271 aaKnown RBP25.02■■□□□ 1.6
LIMS2-202ENST00000355119 NHSQ6T4R5 1651 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 MYH6P13533 1939 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 CCZ1BP86790 482 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 CCZ1P86791 482 aaPredicted RBP25.01■■□□□ 1.59
LIMS2-202ENST00000355119 PTF1AQ7RTS3 328 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 CCDC150Q8NCX0 1101 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 TFCP2L1Q9NZI6 479 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 LAMB1P07942 1786 aa25.01■■□□□ 1.59
LIMS2-202ENST00000355119 MYL5Q02045 173 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 PKN1Q16512 942 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 ISM2Q6H9L7 571 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 OXER1Q8TDS5 423 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 PCDHB6Q9Y5E3 794 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 MYH2Q9UKX2 1941 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 RIOK3O14730 519 aaKnown RBP25■■□□□ 1.59
LIMS2-202ENST00000355119 IGSF3O75054 1194 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 TNNT1P13805 278 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 KRT2P35908 639 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 SBK1Q52WX2 424 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 SPTY2D1Q68D10 685 aaPredicted RBP25■■□□□ 1.59
LIMS2-202ENST00000355119 C16orf45Q96MC5 204 aaPredicted RBP25■■□□□ 1.59
LIMS2-202ENST00000355119 PHF20Q9BVI0 1012 aa25■■□□□ 1.59
LIMS2-202ENST00000355119 CCNL1Q9UK58 526 aaPredicted RBP25■■□□□ 1.59
LIMS2-202ENST00000355119 PRDM1O75626 825 aa24.99■■□□□ 1.59
LIMS2-202ENST00000355119 FANCCQ00597 558 aa24.99■■□□□ 1.59
LIMS2-202ENST00000355119 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
LIMS2-202ENST00000355119 CABP5Q9NP86 173 aa24.99■■□□□ 1.59
LIMS2-202ENST00000355119 DCP1AQ9NPI6 582 aaPredicted RBP24.99■■□□□ 1.59
LIMS2-202ENST00000355119 KCND1Q9NSA2 647 aa24.99■■□□□ 1.59
LIMS2-202ENST00000355119 AATFQ9NY61 560 aaKnown RBP eCLIP24.99■■□□□ 1.59
LIMS2-202ENST00000355119 ARPP21Q9UBL0 812 aaPredicted RBP24.99■■□□□ 1.59
LIMS2-202ENST00000355119 MDM2Q00987 491 aaPredicted RBP24.98■■□□□ 1.59
LIMS2-202ENST00000355119 TROAPQ12815 778 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 PCDHA5Q9Y5H7 936 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 CBFA2T2O43439 604 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 KANK3Q6NY19 840 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 TMTC3Q6ZXV5 915 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 TMC6Q7Z403 805 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 BRMS1Q9HCU9 246 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 VPS54Q9P1Q0 977 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 PAXBP1Q9Y5B6 917 aa24.98■■□□□ 1.59
LIMS2-202ENST00000355119 TRIM75PA6NK02 468 aa24.97■■□□□ 1.59
LIMS2-202ENST00000355119 PLEKHA8P1O95397 391 aa24.97■■□□□ 1.59
LIMS2-202ENST00000355119 TM4SF1P30408 202 aa24.97■■□□□ 1.59
LIMS2-202ENST00000355119 FNBP4Q8N3X1 1017 aaPredicted RBP24.97■■□□□ 1.59
LIMS2-202ENST00000355119 V9GY48 417 aaPredicted RBP24.97■■□□□ 1.59
LIMS2-202ENST00000355119 BMP15O95972 392 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 LMOD1P29536 600 aaPredicted RBP24.96■■□□□ 1.59
LIMS2-202ENST00000355119 NT5C2P49902 561 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 SPECC1Q5M775 1068 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 FOXP4Q8IVH2 680 aaPredicted RBP24.96■■□□□ 1.59
LIMS2-202ENST00000355119 ARHGEF1Q92888 912 aaKnown RBP24.96■■□□□ 1.59
LIMS2-202ENST00000355119 CCDC88AQ3V6T2 1871 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 GRIN1Q05586 938 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 POSTNQ15063 836 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 SHISA4Q96DD7 197 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 HSD3B7Q9H2F3 369 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 IRS2Q9Y4H2 1338 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 THSD7AQ9UPZ6 1657 aa24.96■■□□□ 1.59
LIMS2-202ENST00000355119 POLR2DO15514 142 aaKnown RBP24.95■■□□□ 1.58
LIMS2-202ENST00000355119 PRDX5P30044 214 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 PDE4BQ07343 736 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 CTCFLQ8NI51 663 aaPredicted RBP24.95■■□□□ 1.58
LIMS2-202ENST00000355119 SERTAD1Q9UHV2 236 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 DACH1Q9UI36 760 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 NRDCO43847 1150 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 NT5DC1Q5TFE4 455 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 MAN1B1Q9UKM7 699 aa24.95■■□□□ 1.58
LIMS2-202ENST00000355119 KIAA1551Q9HCM1 1747 aa24.94■■□□□ 1.58
LIMS2-202ENST00000355119 ATP2B1P20020 1258 aa24.94■■□□□ 1.58
LIMS2-202ENST00000355119 DZIP1Q86YF9 867 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms