RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 WTIPA6NIX2 430 aaPredicted RBP25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 HIBADHP31937 336 aaKnown RBP25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 NCAPHQ15003 741 aa25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 IFIT1BQ5T764 474 aaKnown RBP25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 FILIP1Q7Z7B0 1213 aa25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 CCDC82Q8N4S0 544 aa25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 ENAHQ8N8S7 591 aaPredicted RBP25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 MYO1BO43795 1136 aa25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 TAF1P21675 1872 aa25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 AFF2P51816 1311 aa25.59■■□□□ 1.69
NKX2-1-201ENST00000354822 PRPF3O43395 683 aaKnown RBP25.58■■□□□ 1.69
NKX2-1-201ENST00000354822 IGSF3O75054 1194 aa25.58■■□□□ 1.69
NKX2-1-201ENST00000354822 SKILP12757 684 aa25.58■■□□□ 1.69
NKX2-1-201ENST00000354822 CTR9Q6PD62 1173 aa25.58■■□□□ 1.69
NKX2-1-201ENST00000354822 ONECUT3O60422 494 aaPredicted RBP25.58■■□□□ 1.68
NKX2-1-201ENST00000354822 LONRF3Q496Y0 759 aa25.58■■□□□ 1.68
NKX2-1-201ENST00000354822 OLFM4Q6UX06 510 aa25.58■■□□□ 1.68
NKX2-1-201ENST00000354822 CERKQ8TCT0 537 aa25.58■■□□□ 1.68
NKX2-1-201ENST00000354822 CRNKL1Q9BZJ0 848 aaKnown RBP25.58■■□□□ 1.68
NKX2-1-201ENST00000354822 TPD52L1Q16890 204 aaPredicted RBP25.57■■□□□ 1.68
NKX2-1-201ENST00000354822 CMTR1Q8N1G2 835 aaKnown RBP25.57■■□□□ 1.68
NKX2-1-201ENST00000354822 ZNF384Q8TF68 577 aa25.57■■□□□ 1.68
NKX2-1-201ENST00000354822 ATP8A2Q9NTI2 1148 aa25.57■■□□□ 1.68
NKX2-1-201ENST00000354822 FBXO2Q9UK22 296 aaPredicted RBP25.57■■□□□ 1.68
NKX2-1-201ENST00000354822 PAXBP1Q9Y5B6 917 aa25.57■■□□□ 1.68
NKX2-1-201ENST00000354822 DDAH1O94760 285 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 SMC2O95347 1197 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 XPO4Q9C0E2 1151 aaKnown RBP25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 KCND1Q9NSA2 647 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 IFNKQ9P0W0 207 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 SRPRBQ9Y5M8 271 aaKnown RBP25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 DUOX1Q9NRD9 1551 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 ORC4O43929 436 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 MECOMQ03112 1051 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 PNOCQ13519 176 aa25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 METTL16Q86W50 562 aaKnown RBP25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
NKX2-1-201ENST00000354822 USP17L12C9JPN9 530 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 USP17L21D6R901 530 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 TNNT1P13805 278 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 KANK3Q6NY19 840 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 CCDC150Q8NCX0 1101 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 NT5C2P49902 561 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 MYL5Q02045 173 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 NR5A1Q13285 461 aa25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 TRPC5Q9UL62 973 aaPredicted RBP25.55■■□□□ 1.68
NKX2-1-201ENST00000354822 CCZ1BP86790 482 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 CCZ1P86791 482 aaPredicted RBP25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 MDM2Q00987 491 aaPredicted RBP25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 FUT2Q10981 343 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 SPTY2D1Q68D10 685 aaPredicted RBP25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 C16orf45Q96MC5 204 aaPredicted RBP25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 RIOK3O14730 519 aaKnown RBP25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 CBFA2T2O43439 604 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 HSPA1LP34931 641 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 TROAPQ12815 778 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 ARID5BQ14865 1188 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 CABP5Q9NP86 173 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 PCDHB6Q9Y5E3 794 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 PCDHA5Q9Y5H7 936 aa25.54■■□□□ 1.68
NKX2-1-201ENST00000354822 BMP15O95972 392 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 KRT2P35908 639 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 FANCCQ00597 558 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 PKN1Q16512 942 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 SBK1Q52WX2 424 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 PHF20Q9BVI0 1012 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 BRMS1Q9HCU9 246 aa25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 DCP1AQ9NPI6 582 aaPredicted RBP25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 ARPP21Q9UBL0 812 aaPredicted RBP25.53■■□□□ 1.68
NKX2-1-201ENST00000354822 CYP2D7A0A087X1C5 515 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 NRDCO43847 1150 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 ISM2Q6H9L7 571 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 AMIGO3Q86WK7 504 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 SEPT12Q8IYM1 358 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 CCDC34Q96HJ3 373 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 OXER1Q8TDS5 423 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 MYH2Q9UKX2 1941 aa25.52■■□□□ 1.68
NKX2-1-201ENST00000354822 TRIM75PA6NK02 468 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 NT5DC1Q5TFE4 455 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 FOXP4Q8IVH2 680 aaPredicted RBP25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 AATFQ9NY61 560 aaKnown RBP eCLIP25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 V9GY48 417 aaPredicted RBP25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 SMIM22K7EJ46 135 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 KLRK1P26718 216 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 LMOD1P29536 600 aaPredicted RBP25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 PDE4BQ07343 736 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 POSTNQ15063 836 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 TRAPPC3LQ5T215 181 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 TMC6Q7Z403 805 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 DACH1Q9UI36 760 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 MYH6P13533 1939 aa25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 BAZ2AQ9UIF9 1905 aaKnown RBP25.51■■□□□ 1.67
NKX2-1-201ENST00000354822 PRDM1O75626 825 aa25.5■■□□□ 1.67
NKX2-1-201ENST00000354822 TM4SF1P30408 202 aa25.5■■□□□ 1.67
NKX2-1-201ENST00000354822 RFC4P35249 363 aa25.5■■□□□ 1.67
NKX2-1-201ENST00000354822 TRIML1Q8N9V2 468 aa25.5■■□□□ 1.67
NKX2-1-201ENST00000354822 HSD3B7Q9H2F3 369 aa25.5■■□□□ 1.67
NKX2-1-201ENST00000354822 POLR2DO15514 142 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms