RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ASNSP08243 561 aa26.54■■□□□ 1.84
SNX3-202ENST00000349379 SHMT1P34896 483 aa26.54■■□□□ 1.84
SNX3-202ENST00000349379 C12orf60Q5U649 245 aa26.54■■□□□ 1.84
SNX3-202ENST00000349379 GIMAP6Q6P9H5 292 aa26.54■■□□□ 1.84
SNX3-202ENST00000349379 GNAT2P19087 354 aa26.53■■□□□ 1.84
SNX3-202ENST00000349379 CRHR2Q13324 411 aa26.53■■□□□ 1.84
SNX3-202ENST00000349379 SHROOM1Q2M3G4 852 aaPredicted RBP26.53■■□□□ 1.84
SNX3-202ENST00000349379 ZBTB21Q9ULJ3 1066 aa26.53■■□□□ 1.84
SNX3-202ENST00000349379 USP17L5A8MUK1 530 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 USP17L12C9JPN9 530 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 USP17L21D6R901 530 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 GPR25O00155 361 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 GDF11O95390 407 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 ANKRD23Q86SG2 305 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 DDRGK1Q96HY6 314 aa26.52■■□□□ 1.84
SNX3-202ENST00000349379 GREB1LQ9C091 1923 aaPredicted RBP26.51■■□□□ 1.83
SNX3-202ENST00000349379 SBK1Q52WX2 424 aa26.51■■□□□ 1.83
SNX3-202ENST00000349379 CTR9Q6PD62 1173 aa26.51■■□□□ 1.83
SNX3-202ENST00000349379 ZNF280CQ8ND82 737 aa26.51■■□□□ 1.83
SNX3-202ENST00000349379 WDR18Q9BV38 432 aa26.51■■□□□ 1.83
SNX3-202ENST00000349379 EPB41L4AQ9HCS5 686 aaPredicted RBP26.51■■□□□ 1.83
SNX3-202ENST00000349379 ARPP21Q9UBL0 812 aaPredicted RBP26.51■■□□□ 1.83
SNX3-202ENST00000349379 CYP2D7A0A087X1C5 515 aa26.5■■□□□ 1.83
SNX3-202ENST00000349379 SMIM22K7EJ46 135 aa26.5■■□□□ 1.83
SNX3-202ENST00000349379 GPAT2Q6NUI2 795 aa26.5■■□□□ 1.83
SNX3-202ENST00000349379 ZNF296Q8WUU4 475 aaPredicted RBP26.5■■□□□ 1.83
SNX3-202ENST00000349379 SWAP70Q9UH65 585 aa26.5■■□□□ 1.83
SNX3-202ENST00000349379 TRIM75PA6NK02 468 aa26.49■■□□□ 1.83
SNX3-202ENST00000349379 TRIM6-TRIM34B2RNG4 842 aa26.49■■□□□ 1.83
SNX3-202ENST00000349379 SPP2Q13103 211 aa26.49■■□□□ 1.83
SNX3-202ENST00000349379 TAF1CQ15572 869 aaPredicted RBP26.49■■□□□ 1.83
SNX3-202ENST00000349379 CERKLQ49MI3 558 aaPredicted RBP26.49■■□□□ 1.83
SNX3-202ENST00000349379 FASTKD5Q7L8L6 764 aaKnown RBP26.49■■□□□ 1.83
SNX3-202ENST00000349379 AS3MTQ9HBK9 375 aa26.49■■□□□ 1.83
SNX3-202ENST00000349379 HELLSQ9NRZ9 838 aa26.49■■□□□ 1.83
SNX3-202ENST00000349379 ROBO3Q96MS0 1386 aa26.48■■□□□ 1.83
SNX3-202ENST00000349379 PATL2C9JE40 543 aaKnown RBP26.48■■□□□ 1.83
SNX3-202ENST00000349379 GH2P01242 217 aa26.48■■□□□ 1.83
SNX3-202ENST00000349379 SH3D19Q5HYK7 790 aa26.48■■□□□ 1.83
SNX3-202ENST00000349379 AMOTL1Q8IY63 956 aa26.48■■□□□ 1.83
SNX3-202ENST00000349379 SLC44A5Q8NCS7 719 aa26.48■■□□□ 1.83
SNX3-202ENST00000349379 DYNLL2Q96FJ2 89 aa26.48■■□□□ 1.83
SNX3-202ENST00000349379 C16orf86Q6ZW13 317 aa26.47■■□□□ 1.83
SNX3-202ENST00000349379 RILPL2Q969X0 211 aa26.47■■□□□ 1.83
SNX3-202ENST00000349379 ZFYVE28Q9HCC9 887 aa26.47■■□□□ 1.83
SNX3-202ENST00000349379 ADGRA2Q96PE1 1338 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 A0A0D9SFI3 127 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 PDHXO00330 501 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 FOXP2O15409 715 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 ABCB5Q2M3G0 1257 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 CCDC129Q6ZRS4 1044 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 IFNL3Q8IZI9 196 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 FAM227BQ96M60 508 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 SLC45A1Q9Y2W3 748 aa26.46■■□□□ 1.83
SNX3-202ENST00000349379 FKTNO75072 461 aa26.45■■□□□ 1.82
SNX3-202ENST00000349379 GUCY1A2P33402 732 aa26.45■■□□□ 1.82
SNX3-202ENST00000349379 CDK8P49336 464 aa26.45■■□□□ 1.82
SNX3-202ENST00000349379 BACE1P56817 501 aa26.45■■□□□ 1.82
SNX3-202ENST00000349379 TTC22Q5TAA0 569 aa26.45■■□□□ 1.82
SNX3-202ENST00000349379 PROCA1Q8NCQ7 364 aaPredicted RBP26.45■■□□□ 1.82
SNX3-202ENST00000349379 TLR2O60603 784 aa26.44■■□□□ 1.82
SNX3-202ENST00000349379 GSPT1P15170 499 aaKnown RBP26.44■■□□□ 1.82
SNX3-202ENST00000349379 SDSP20132 328 aa26.44■■□□□ 1.82
SNX3-202ENST00000349379 NMIQ13287 307 aaPredicted RBP26.44■■□□□ 1.82
SNX3-202ENST00000349379 GADL1Q6ZQY3 521 aa26.44■■□□□ 1.82
SNX3-202ENST00000349379 CENPQQ7L2Z9 268 aaPredicted RBP26.44■■□□□ 1.82
SNX3-202ENST00000349379 TNS4Q8IZW8 715 aa26.44■■□□□ 1.82
SNX3-202ENST00000349379 MGAMO43451 1857 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 TDO2P48775 406 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 HMGCS2P54868 508 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 MCMDC2Q4G0Z9 681 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 CABP5Q9NP86 173 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 AGTPBP1Q9UPW5 1226 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 ZSWIM8A7E2V4 1837 aa26.43■■□□□ 1.82
SNX3-202ENST00000349379 C19orf81C9J6K1 198 aa26.42■■□□□ 1.82
SNX3-202ENST00000349379 MTMR2Q13614 643 aa26.42■■□□□ 1.82
SNX3-202ENST00000349379 CCDC17Q96LX7 622 aa26.42■■□□□ 1.82
SNX3-202ENST00000349379 NACAP1Q9BZK3 213 aa26.42■■□□□ 1.82
SNX3-202ENST00000349379 USP17L10C9JJH3 530 aa26.41■■□□□ 1.82
SNX3-202ENST00000349379 APPP05067 770 aa26.41■■□□□ 1.82
SNX3-202ENST00000349379 DGKZQ13574 1117 aa26.41■■□□□ 1.82
SNX3-202ENST00000349379 TREML2Q5T2D2 321 aa26.41■■□□□ 1.82
SNX3-202ENST00000349379 PARK7Q99497 189 aaKnown RBP26.41■■□□□ 1.82
SNX3-202ENST00000349379 LAMA4Q16363 1823 aa26.41■■□□□ 1.82
SNX3-202ENST00000349379 MINDY4BA8MYZ0 360 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 AKR1B1P15121 316 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 SEPT2Q15019 361 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 RAB3GAP1Q15042 981 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 VPS53Q5VIR6 699 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 C17orf99Q6UX52 265 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 TMEM179Q6ZVK1 233 aa26.4■■□□□ 1.82
SNX3-202ENST00000349379 ZNF589Q86UQ0 364 aaPredicted RBP26.4■■□□□ 1.82
SNX3-202ENST00000349379 SP3Q02447 781 aa26.39■■□□□ 1.82
SNX3-202ENST00000349379 ALX1Q15699 326 aa26.39■■□□□ 1.82
SNX3-202ENST00000349379 CTU1Q7Z7A3 348 aaKnown RBP26.39■■□□□ 1.82
SNX3-202ENST00000349379 C12orf42Q96LP6 360 aa26.39■■□□□ 1.82
SNX3-202ENST00000349379 NAPBQ9H115 298 aa26.39■■□□□ 1.82
SNX3-202ENST00000349379 MYH4Q9Y623 1939 aa26.39■■□□□ 1.81
SNX3-202ENST00000349379 CCDC171Q6TFL3 1326 aa26.39■■□□□ 1.81
SNX3-202ENST00000349379 HIP1O00291 1037 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms