RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 HSD3B7Q9H2F3 369 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 TNKSO95271 1327 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 SPATA31A5Q5VU36 1347 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 SPATA31A7Q8IWB4 1347 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 POSTNQ15063 836 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 CATIPQ7Z7H3 387 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 IQCA1Q86XH1 822 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 NUP133Q8WUM0 1156 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 KCNJ14Q9UNX9 436 aa17.74■□□□□ 0.43
TNFSF13-202ENST00000349228 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
TNFSF13-202ENST00000349228 USP27XA6NNY8 438 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 DDAH1O94760 285 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 SARSP49591 514 aaKnown RBP17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 FCHSD1Q86WN1 690 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 FOXP4Q8IVH2 680 aaPredicted RBP17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 FEZ1Q99689 392 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 ZNF831Q5JPB2 1677 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 ECM29Q5VYK3 1845 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 A0A0G2JS52 829 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 VSTM4Q8IW00 320 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 ENOX1Q8TC92 643 aaKnown RBP17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 ZNF592Q92610 1267 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 SMARCE1Q969G3 411 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 AATFQ9NY61 560 aaKnown RBP eCLIP17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 MINPP1Q9UNW1 487 aa17.72■□□□□ 0.43
TNFSF13-202ENST00000349228 KRT2P35908 639 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 GYG1P46976 350 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 ERFEQ4G0M1 354 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 E4F1Q66K89 784 aaPredicted RBP17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 ISM2Q6H9L7 571 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 FBXO33Q7Z6M2 555 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 SDR42E1Q8WUS8 393 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 FERMT2Q96AC1 680 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 ERO1AQ96HE7 468 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 NYXQ9GZU5 481 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 TRMT1Q9NXH9 659 aaKnown RBP17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 NRAPQ86VF7 1730 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
TNFSF13-202ENST00000349228 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 ORC4O43929 436 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 MORC3Q14149 939 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 CFAP100Q494V2 611 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 ENAHQ8N8S7 591 aaPredicted RBP17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 FAM84BQ96KN1 310 aaPredicted RBP17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 PHF20Q9BVI0 1012 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 MAN1B1Q9UKM7 699 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 PCDHB6Q9Y5E3 794 aa17.71■□□□□ 0.42
TNFSF13-202ENST00000349228 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 TOP1P11387 765 aaKnown RBP17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 ATP1A3P13637 1013 aa17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 ERCC5P28715 1186 aaPredicted RBP17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 FUT2Q10981 343 aa17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 SPATA20Q8TB22 786 aa17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 PPP1R13BQ96KQ4 1090 aa17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 TMX1Q9H3N1 280 aa17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
TNFSF13-202ENST00000349228 NR5A1Q13285 461 aa17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 ATP8A2Q9NTI2 1148 aa17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 FANCLQ9NW38 375 aa17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 SERTAD1Q9UHV2 236 aa17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 CNTNAP4Q9C0A0 1308 aa17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 PKN1Q16512 942 aa17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 PYM1Q9BRP8 204 aaKnown RBP17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
TNFSF13-202ENST00000349228 ACTN4O43707 911 aaKnown RBP17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 SLU7O95391 586 aaKnown RBP17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 CCDC82Q8N4S0 544 aa17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
TNFSF13-202ENST00000349228 BMP6P22004 513 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 TROAPQ12815 778 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 RC3H1Q5TC82 1133 aaKnown RBP17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 L2HGDHQ9H9P8 463 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 DUOX1Q9NRD9 1551 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 ZSCAN12O43309 604 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 ZNF18P17022 549 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 TRAPPC10P48553 1259 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 OXER1Q8TDS5 423 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 NSUN4Q96CB9 384 aaKnown RBP17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
TNFSF13-202ENST00000349228 MYH14Q7Z406 1995 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms