RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CALM2P0DP24 149 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 CALM3P0DP25 149 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 RXRAP19793 462 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 CDK8P49336 464 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 RTN1Q16799 776 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 OGFOD1Q8N543 542 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 AGBL3Q8NEM8 1001 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
PTN-201ENST00000348225 ADD1P35611 737 aaKnown RBP21.79■■□□□ 1.08
PTN-201ENST00000348225 CDC37L1Q7L3B6 337 aa21.79■■□□□ 1.08
PTN-201ENST00000348225 CCDC144CPQ8IYA2 1237 aa21.79■■□□□ 1.08
PTN-201ENST00000348225 GMLQ99445 158 aa21.79■■□□□ 1.08
PTN-201ENST00000348225 TCP11L1Q9NUJ3 509 aa21.79■■□□□ 1.08
PTN-201ENST00000348225 ORC3Q9UBD5 711 aaPredicted RBP21.79■■□□□ 1.08
PTN-201ENST00000348225 DDAH1O94760 285 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 RASA1P20936 1047 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 CDC27P30260 824 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 SLC44A5Q8NCS7 719 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 NLGN2Q8NFZ4 835 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 NUP133Q8WUM0 1156 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 SWAP70Q9UH65 585 aa21.78■■□□□ 1.08
PTN-201ENST00000348225 TNIP1Q15025 636 aa21.77■■□□□ 1.08
PTN-201ENST00000348225 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.08
PTN-201ENST00000348225 DGKHQ86XP1 1220 aa21.77■■□□□ 1.08
PTN-201ENST00000348225 DHX36Q9H2U1 1008 aaKnown RBP21.77■■□□□ 1.08
PTN-201ENST00000348225 MYH8P13535 1937 aa21.77■■□□□ 1.08
PTN-201ENST00000348225 STK36Q9NRP7 1315 aa21.77■■□□□ 1.08
PTN-201ENST00000348225 FDPSP14324 419 aaKnown RBP21.77■■□□□ 1.07
PTN-201ENST00000348225 NFIAQ12857 509 aa21.77■■□□□ 1.07
PTN-201ENST00000348225 FANCBQ8NB91 859 aa21.77■■□□□ 1.07
PTN-201ENST00000348225 RGS22Q8NE09 1264 aa21.77■■□□□ 1.07
PTN-201ENST00000348225 FAM217BQ9NTX9 383 aaPredicted RBP21.77■■□□□ 1.07
PTN-201ENST00000348225 RBM28Q9NW13 759 aaKnown RBP21.77■■□□□ 1.07
PTN-201ENST00000348225 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.07
PTN-201ENST00000348225 TAOK2Q9UL54 1235 aa21.77■■□□□ 1.07
PTN-201ENST00000348225 PCDHAC2Q9Y5I4 1007 aa21.77■■□□□ 1.07
PTN-201ENST00000348225 IFNAR1P17181 557 aa21.76■■□□□ 1.07
PTN-201ENST00000348225 GABPAQ06546 454 aa21.76■■□□□ 1.07
PTN-201ENST00000348225 CXCL9Q07325 125 aa21.76■■□□□ 1.07
PTN-201ENST00000348225 SKOR2Q2VWA4 1001 aaPredicted RBP21.76■■□□□ 1.07
PTN-201ENST00000348225 ANKS1AQ92625 1134 aa21.76■■□□□ 1.07
PTN-201ENST00000348225 EHD4Q9H223 541 aa21.76■■□□□ 1.07
PTN-201ENST00000348225 TMOD2Q9NZR1 351 aa21.76■■□□□ 1.07
PTN-201ENST00000348225 NMT2O60551 498 aa21.75■■□□□ 1.07
PTN-201ENST00000348225 MMP14P50281 582 aa21.75■■□□□ 1.07
PTN-201ENST00000348225 DLGAP5Q15398 846 aa21.75■■□□□ 1.07
PTN-201ENST00000348225 NTRK3Q16288 839 aa21.75■■□□□ 1.07
PTN-201ENST00000348225 NEDD1Q8NHV4 660 aa21.75■■□□□ 1.07
PTN-201ENST00000348225 ZSCAN16Q9H4T2 348 aaPredicted RBP21.75■■□□□ 1.07
PTN-201ENST00000348225 KAT14Q9H8E8 782 aa21.75■■□□□ 1.07
PTN-201ENST00000348225 ZBTB12Q9Y330 459 aaPredicted RBP21.75■■□□□ 1.07
PTN-201ENST00000348225 GOLGB1Q14789 3259 aaKnown RBP21.75■■□□□ 1.07
PTN-201ENST00000348225 SPDYE2BA6NHP3 402 aa21.74■■□□□ 1.07
PTN-201ENST00000348225 ENTPD3O75355 529 aa21.74■■□□□ 1.07
PTN-201ENST00000348225 SPDYE6P0CI01 402 aa21.74■■□□□ 1.07
PTN-201ENST00000348225 SSRP1Q08945 709 aaKnown RBP21.74■■□□□ 1.07
PTN-201ENST00000348225 TRIM22Q8IYM9 498 aa21.74■■□□□ 1.07
PTN-201ENST00000348225 WASF1Q92558 559 aa21.74■■□□□ 1.07
PTN-201ENST00000348225 C8orf76Q96K31 380 aa21.74■■□□□ 1.07
PTN-201ENST00000348225 PRMT6Q96LA8 375 aaPredicted RBP21.74■■□□□ 1.07
PTN-201ENST00000348225 TDRD3Q9H7E2 651 aaKnown RBP21.74■■□□□ 1.07
PTN-201ENST00000348225 COL2A1P02458 1487 aaPredicted RBP21.74■■□□□ 1.07
PTN-201ENST00000348225 TRAK2O60296 914 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 PPFIA3O75145 1194 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 CACNB3P54284 484 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 TROAPQ12815 778 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 CTCFLQ8NI51 663 aaPredicted RBP21.73■■□□□ 1.07
PTN-201ENST00000348225 IL17RBQ9NRM6 502 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 FAM198AQ9UFP1 575 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 PLIN4Q96Q06 1357 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 FMNL1O95466 1100 aaPredicted RBP21.73■■□□□ 1.07
PTN-201ENST00000348225 RASSF7Q02833 373 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 FOXD4L6Q3SYB3 417 aaPredicted RBP21.73■■□□□ 1.07
PTN-201ENST00000348225 RCSD1Q6JBY9 416 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 FOXD4L3Q6VB84 417 aaPredicted RBP21.73■■□□□ 1.07
PTN-201ENST00000348225 FERMT3Q86UX7 667 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 MTMR14Q8NCE2 650 aa21.73■■□□□ 1.07
PTN-201ENST00000348225 RPS12P25398 132 aaKnown RBP21.72■■□□□ 1.07
PTN-201ENST00000348225 TCP10Q12799 353 aa21.72■■□□□ 1.07
PTN-201ENST00000348225 CSPP1Q1MSJ5 1256 aa21.72■■□□□ 1.07
PTN-201ENST00000348225 ZSCAN29Q8IWY8 852 aaPredicted RBP21.72■■□□□ 1.07
PTN-201ENST00000348225 PHKBQ93100 1093 aa21.72■■□□□ 1.07
PTN-201ENST00000348225 SLC26A6Q9BXS9 759 aa21.72■■□□□ 1.07
PTN-201ENST00000348225 PI4KBQ9UBF8 816 aa21.72■■□□□ 1.07
PTN-201ENST00000348225 FOSBP53539 338 aa21.71■■□□□ 1.07
PTN-201ENST00000348225 EIF6P56537 245 aaKnown RBP21.71■■□□□ 1.07
PTN-201ENST00000348225 RESTQ13127 1097 aa21.71■■□□□ 1.07
PTN-201ENST00000348225 CRACR2BQ8N4Y2 399 aaPredicted RBP21.71■■□□□ 1.07
PTN-201ENST00000348225 MAP3K14Q99558 947 aa21.71■■□□□ 1.07
PTN-201ENST00000348225 ALG1Q9BT22 464 aa21.71■■□□□ 1.07
PTN-201ENST00000348225 TRIM34Q9BYJ4 488 aa21.71■■□□□ 1.07
PTN-201ENST00000348225 LMBRD1Q9NUN5 540 aa21.71■■□□□ 1.07
PTN-201ENST00000348225 ATRNL1Q5VV63 1379 aa21.7■■□□□ 1.06
PTN-201ENST00000348225 PRPF40AO75400 957 aaKnown RBP21.7■■□□□ 1.06
PTN-201ENST00000348225 KIF5BP33176 963 aa21.7■■□□□ 1.06
PTN-201ENST00000348225 PNMA1Q8ND90 353 aa21.7■■□□□ 1.06
PTN-201ENST00000348225 FBXO18Q8NFZ0 1043 aa21.7■■□□□ 1.06
PTN-201ENST00000348225 CHAMP1Q96JM3 812 aa21.7■■□□□ 1.06
PTN-201ENST00000348225 STX8Q9UNK0 236 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms