RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 TRIM17Q9Y577 477 aa18.93■□□□□ 0.62
TSPAN4-201ENST00000346501 MYH7P12883 1935 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 PLCD1P51178 756 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 PDE1AP54750 535 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 ABCB5Q2M3G0 1257 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 TATDN1Q6P1N9 297 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 FBXO46Q6PJ61 603 aaPredicted RBP18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 CD99L2Q8TCZ2 262 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 OTUD7AQ8TE49 926 aaPredicted RBP18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 EVI5LQ96CN4 794 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 FEZ1Q99689 392 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 STAP2Q9UGK3 403 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 AGTPBP1Q9UPW5 1226 aa18.92■□□□□ 0.62
TSPAN4-201ENST00000346501 USP17L10C9JJH3 530 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 GH2P01242 217 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 APPP05067 770 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 OSBPP22059 807 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 HMGCS2P54868 508 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 CCDC84Q86UT8 332 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 CHD1LQ86WJ1 897 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 NACAP1Q9BZK3 213 aa18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 ARPP21Q9UBL0 812 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-201ENST00000346501 MPHOSPH10O00566 681 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 PRKAB2O43741 272 aa18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 BACE1P56817 501 aa18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 RAB3GAP1Q15042 981 aa18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 SLFNL1Q499Z3 407 aa18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 GIMAP6Q6P9H5 292 aa18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 STRBPQ96SI9 672 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
TSPAN4-201ENST00000346501 USP17L12C9JPN9 530 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 USP17L21D6R901 530 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 GNRH1P01148 92 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 IGHDP01880 384 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 IRX6P78412 446 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 MTMR2Q13614 643 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 RRP1BQ14684 758 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 SH3D19Q5HYK7 790 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 GPAT2Q6NUI2 795 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 OTOP1Q7RTM1 612 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 TICAM2Q86XR7 235 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 OSBP2Q969R2 916 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 ZNF287Q9HBT7 754 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 CPA4Q9UI42 421 aa18.89■□□□□ 0.61
TSPAN4-201ENST00000346501 TRIM6-TRIM34B2RNG4 842 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 GPAA1O43292 621 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 HOXD10P28358 340 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 TDO2P48775 406 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 USP14P54578 494 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 NUCB1Q02818 461 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 MOGSQ13724 837 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 C17orf99Q6UX52 265 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 CCDC17Q96LX7 622 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 SALL3Q9BXA9 1300 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 ATAD5Q96QE3 1844 aa18.88■□□□□ 0.61
TSPAN4-201ENST00000346501 SIPA1L1O43166 1804 aa18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 CYP2C8P10632 490 aa18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 SHMT1P34896 483 aa18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 LACTBP83111 547 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 GABPAQ06546 454 aa18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 C12orf60Q5U649 245 aa18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 USP17L2Q6R6M4 530 aa18.87■□□□□ 0.61
TSPAN4-201ENST00000346501 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 CHGBP05060 677 aa18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 CYP2D6P10635 497 aa18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 GCLCP48506 637 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 PRMT2P55345 433 aa18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 RILPL2Q969X0 211 aa18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 HPS5Q9UPZ3 1129 aa18.86■□□□□ 0.61
TSPAN4-201ENST00000346501 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 PATL2C9JE40 543 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 FCGRTP55899 365 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 SBK1Q52WX2 424 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 ZMYM1Q5SVZ6 1142 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 CTR9Q6PD62 1173 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 SH2D4AQ9H788 454 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 MKNK2Q9HBH9 465 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 ARHGEF10LQ9HCE6 1279 aa18.85■□□□□ 0.61
TSPAN4-201ENST00000346501 PHIPQ8WWQ0 1821 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 PSMC4P43686 418 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 CDK8P49336 464 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 TREML2Q5T2D2 321 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 C16orf86Q6ZW13 317 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 GTF3C2Q8WUA4 911 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 DYNLL2Q96FJ2 89 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 NAPBQ9H115 298 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 PTPN22Q9Y2R2 807 aa18.84■□□□□ 0.61
TSPAN4-201ENST00000346501 M0R2C6 588 aa18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 JAG1P78504 1218 aa18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 SEPT2Q15019 361 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms