RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 HPS5Q9UPZ3 1129 aa19.41■□□□□ 0.7
RAB5C-201ENST00000346213 MX1P20591 662 aa19.4■□□□□ 0.7
RAB5C-201ENST00000346213 SP3Q02447 781 aa19.4■□□□□ 0.7
RAB5C-201ENST00000346213 OTUD7BQ6GQQ9 843 aa19.4■□□□□ 0.7
RAB5C-201ENST00000346213 TMED8Q6PL24 325 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-201ENST00000346213 GADL1Q6ZQY3 521 aa19.4■□□□□ 0.7
RAB5C-201ENST00000346213 FOXP4Q8IVH2 680 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-201ENST00000346213 CRNKL1Q9BZJ0 848 aaKnown RBP19.4■□□□□ 0.7
RAB5C-201ENST00000346213 EHD4Q9H223 541 aa19.4■□□□□ 0.7
RAB5C-201ENST00000346213 ZFYVE28Q9HCC9 887 aa19.4■□□□□ 0.7
RAB5C-201ENST00000346213 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-201ENST00000346213 TTC41PQ6P2S7 1318 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 FOXP2O15409 715 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 PEX10O60683 326 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 GH2P01242 217 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 HMGCS2P54868 508 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 POTEEQ6S8J3 1075 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 CRACR2BQ8N4Y2 399 aaPredicted RBP19.39■□□□□ 0.69
RAB5C-201ENST00000346213 LNPKQ9C0E8 428 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 MCM9Q9NXL9 1143 aa19.39■□□□□ 0.69
RAB5C-201ENST00000346213 BAZ2AQ9UIF9 1905 aaKnown RBP19.39■□□□□ 0.69
RAB5C-201ENST00000346213 CCDC85CA6NKD9 419 aa19.38■□□□□ 0.69
RAB5C-201ENST00000346213 MTMR2Q13614 643 aa19.38■□□□□ 0.69
RAB5C-201ENST00000346213 CLEC10AQ8IUN9 316 aa19.38■□□□□ 0.69
RAB5C-201ENST00000346213 ZNF280CQ8ND82 737 aa19.38■□□□□ 0.69
RAB5C-201ENST00000346213 STRBPQ96SI9 672 aaKnown RBP19.38■□□□□ 0.69
RAB5C-201ENST00000346213 RWDD1Q9H446 243 aaPredicted RBP19.38■□□□□ 0.69
RAB5C-201ENST00000346213 ZCCHC17Q9NP64 241 aaKnown RBP19.38■□□□□ 0.69
RAB5C-201ENST00000346213 SERPINB13Q9UIV8 391 aa19.38■□□□□ 0.69
RAB5C-201ENST00000346213 TRIM17Q9Y577 477 aa19.38■□□□□ 0.69
RAB5C-201ENST00000346213 USP17L5A8MUK1 530 aa19.37■□□□□ 0.69
RAB5C-201ENST00000346213 HLA-DOAP06340 250 aa19.37■□□□□ 0.69
RAB5C-201ENST00000346213 GCC1Q96CN9 775 aa19.37■□□□□ 0.69
RAB5C-201ENST00000346213 STAP2Q9UGK3 403 aa19.37■□□□□ 0.69
RAB5C-201ENST00000346213 MKI67P46013 3256 aaKnown RBP19.37■□□□□ 0.69
RAB5C-201ENST00000346213 TNRC18O15417 2968 aaPredicted RBP19.36■□□□□ 0.69
RAB5C-201ENST00000346213 BCRP11274 1271 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 PDE1AP54750 535 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 SH3D19Q5HYK7 790 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 CERS3Q8IU89 383 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 ACER1Q8TDN7 264 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 WDR18Q9BV38 432 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.36■□□□□ 0.69
RAB5C-201ENST00000346213 GSG1L2A8MUP6 293 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 RNF113AO15541 343 aaKnown RBP19.36■□□□□ 0.69
RAB5C-201ENST00000346213 AGTPBP1Q9UPW5 1226 aa19.36■□□□□ 0.69
RAB5C-201ENST00000346213 GLRX3O76003 335 aaKnown RBP19.35■□□□□ 0.69
RAB5C-201ENST00000346213 LACTBP83111 547 aaPredicted RBP19.35■□□□□ 0.69
RAB5C-201ENST00000346213 CTR9Q6PD62 1173 aa19.35■□□□□ 0.69
RAB5C-201ENST00000346213 APPBP2Q92624 585 aa19.35■□□□□ 0.69
RAB5C-201ENST00000346213 GPATCH3Q96I76 525 aa19.35■□□□□ 0.69
RAB5C-201ENST00000346213 TRIM47Q96LD4 638 aa19.35■□□□□ 0.69
RAB5C-201ENST00000346213 EMILIN3Q9NT22 766 aa19.35■□□□□ 0.69
RAB5C-201ENST00000346213 SLC4A4Q9Y6R1 1079 aa19.35■□□□□ 0.69
RAB5C-201ENST00000346213 USP17L12C9JPN9 530 aa19.34■□□□□ 0.69
RAB5C-201ENST00000346213 USP17L21D6R901 530 aa19.34■□□□□ 0.69
RAB5C-201ENST00000346213 POLR3DP05423 398 aaPredicted RBP19.34■□□□□ 0.69
RAB5C-201ENST00000346213 C12orf60Q5U649 245 aa19.34■□□□□ 0.69
RAB5C-201ENST00000346213 FBXO46Q6PJ61 603 aaPredicted RBP19.34■□□□□ 0.69
RAB5C-201ENST00000346213 CCDC129Q6ZRS4 1044 aa19.34■□□□□ 0.69
RAB5C-201ENST00000346213 A0A1W2PRG0 241 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 GPAA1O43292 621 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 ASNSP08243 561 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 SOX10P56693 466 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 BACE1P56817 501 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 KIAA1755Q5JYT7 1200 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 TTC6Q86TZ1 520 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 SIAH1Q8IUQ4 282 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 ERO1AQ96HE7 468 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 PTPN22Q9Y2R2 807 aa19.33■□□□□ 0.69
RAB5C-201ENST00000346213 AKR1B1P15121 316 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 PDE4AP27815 886 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 NUCB1Q02818 461 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 SEPT2Q15019 361 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 CERKLQ49MI3 558 aaPredicted RBP19.33■□□□□ 0.68
RAB5C-201ENST00000346213 FASTKD5Q7L8L6 764 aaKnown RBP19.33■□□□□ 0.68
RAB5C-201ENST00000346213 EFCC1Q9HA90 598 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 ATP8A2Q9NTI2 1148 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 PTCH2Q9Y6C5 1203 aa19.33■□□□□ 0.68
RAB5C-201ENST00000346213 ZYXQ15942 572 aaKnown RBP19.32■□□□□ 0.68
RAB5C-201ENST00000346213 ZMYM1Q5SVZ6 1142 aa19.32■□□□□ 0.68
RAB5C-201ENST00000346213 SKAP1Q86WV1 359 aa19.32■□□□□ 0.68
RAB5C-201ENST00000346213 PLEKHM2Q8IWE5 1019 aa19.32■□□□□ 0.68
RAB5C-201ENST00000346213 PROCA1Q8NCQ7 364 aaPredicted RBP19.32■□□□□ 0.68
RAB5C-201ENST00000346213 PARK7Q99497 189 aaKnown RBP19.32■□□□□ 0.68
RAB5C-201ENST00000346213 TACC3Q9Y6A5 838 aa19.32■□□□□ 0.68
RAB5C-201ENST00000346213 ABCB5Q2M3G0 1257 aa19.31■□□□□ 0.68
RAB5C-201ENST00000346213 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
RAB5C-201ENST00000346213 FSD1Q9BTV5 496 aa19.31■□□□□ 0.68
RAB5C-201ENST00000346213 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.31■□□□□ 0.68
RAB5C-201ENST00000346213 TRIM34Q9BYJ4 488 aa19.31■□□□□ 0.68
RAB5C-201ENST00000346213 ASCC2Q9H1I8 757 aaPredicted RBP19.31■□□□□ 0.68
RAB5C-201ENST00000346213 SLC45A1Q9Y2W3 748 aa19.31■□□□□ 0.68
RAB5C-201ENST00000346213 ERC2O15083 957 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 RAB3GAP1Q15042 981 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 ZSCAN25Q6NSZ9 544 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 CDK8P49336 464 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 PKN2Q16513 984 aaKnown RBP19.3■□□□□ 0.68
RAB5C-201ENST00000346213 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms