RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 ATP2B1P20020 1258 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 TXLNAP40222 546 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 ITPK1Q13572 414 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 CCDC94Q9BW85 323 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 KCNF1Q9H3M0 494 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 ARGLU1Q9NWB6 273 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 TNKSO95271 1327 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 BAG3O95817 575 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 GYG1P46976 350 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 CEP135Q66GS9 1140 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 KRBA2Q6ZNG9 492 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 ANKRD20A12PQ8NF67 263 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 ARPP21Q9UBL0 812 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 STRCQ7RTU9 1775 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 TPM1P09493 284 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 GNAQP50148 359 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 MNAT1P51948 309 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 UBASH3AP57075 661 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
NBR1-201ENST00000341165 C17orf53Q8N3J3 647 aaPredicted RBP9.1□□□□□ -0.95
NBR1-201ENST00000341165 TRIML1Q8N9V2 468 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 KIF18AQ8NI77 898 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 ATP8A2Q9NTI2 1148 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 IFNKQ9P0W0 207 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
NBR1-201ENST00000341165 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 AHDC1Q5TGY3 1603 aaPredicted RBP9.1□□□□□ -0.95
NBR1-201ENST00000341165 CNTNAP4Q9C0A0 1308 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 PIP4K2BP78356 416 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 CLSTN1O94985 981 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 TOP1P11387 765 aaKnown RBP9.1□□□□□ -0.95
NBR1-201ENST00000341165 CALML3P27482 149 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 USP5P45974 858 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 FILIP1LQ4L180 1135 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 FERMT2Q96AC1 680 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 MINPP1Q9UNW1 487 aa9.1□□□□□ -0.95
NBR1-201ENST00000341165 ANKRD36CQ5JPF3 1778 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 TSPY2A6NKD2 308 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 BTBD18B2RXH4 712 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 PRPF3O43395 683 aaKnown RBP9.09□□□□□ -0.95
NBR1-201ENST00000341165 FANCCQ00597 558 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 NTRK3Q16288 839 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 DPCR1Q3MIW9 517 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 AIFM3Q96NN9 605 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 ANKIB1Q9P2G1 1089 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 NRBP1Q9UHY1 535 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 NID2Q14112 1375 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 PDS5AQ29RF7 1337 aaKnown RBP9.09□□□□□ -0.95
NBR1-201ENST00000341165 ITGB4P16144 1822 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 MYCNP04198 464 aaPredicted RBP9.09□□□□□ -0.95
NBR1-201ENST00000341165 NLRP5P59047 1200 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 SLC10A5Q5PT55 438 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 SLF2Q8IX21 1173 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 C10orf67Q8IYJ2 551 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 WDR66Q8TBY9 1149 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 CACTINQ8WUQ7 758 aaKnown RBP9.09□□□□□ -0.95
NBR1-201ENST00000341165 SDR42E1Q8WUS8 393 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 CENPHQ9H3R5 247 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 KAT14Q9H8E8 782 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 CABP5Q9NP86 173 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 NARFQ9UHQ1 456 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 PLCH1Q4KWH8 1693 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 ZSCAN12O43309 604 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 RPS6KA4O75676 772 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 RFC4P35249 363 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 FAM98CQ17RN3 349 aaKnown RBP9.09□□□□□ -0.95
NBR1-201ENST00000341165 KCNJ14Q9UNX9 436 aa9.09□□□□□ -0.95
NBR1-201ENST00000341165 LRMPQ12912 555 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 POSTNQ15063 836 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 ZNF804AQ7Z570 1209 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 CCDC47Q96A33 483 aaKnown RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 OSBPL5Q9H0X9 879 aaPredicted RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 GJB4Q9NTQ9 266 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 MYH3P11055 1940 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 GOLGA6L9A6NEM1 432 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 GNPATO15228 680 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 HSP90B2PQ58FF3 399 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 RASSF8Q8NHQ8 419 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 XPO4Q9C0E2 1151 aaKnown RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 MKNK2Q9HBH9 465 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 SRPRBQ9Y5M8 271 aaKnown RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 ZNF804BA4D1E1 1349 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 FAM237AA0A1B0GTK4 181 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 WDHD1O75717 1129 aaPredicted RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 PTPREP23469 700 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 SNAP23O00161 211 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 PNOCQ13519 176 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 PTPAQ15257 358 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 SYCP1Q15431 976 aa9.08□□□□□ -0.96
NBR1-201ENST00000341165 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 ERCC4Q92889 916 aaPredicted RBP9.08□□□□□ -0.96
NBR1-201ENST00000341165 DRC1Q96MC2 740 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms