RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
C2orf88-201ENST00000340623 USP48Q86UV5 1035 aa13.53□□□□□ -0.24
C2orf88-201ENST00000340623 CCDC12Q8WUD4 166 aaPredicted RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 GIMAP6Q6P9H5 292 aa13.53□□□□□ -0.24
C2orf88-201ENST00000340623 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 IL1R1P14778 569 aa13.53□□□□□ -0.24
C2orf88-201ENST00000340623 GMPSP49915 693 aaPredicted RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 CXCL9Q07325 125 aa13.53□□□□□ -0.24
C2orf88-201ENST00000340623 APOA5Q6Q788 366 aa13.53□□□□□ -0.24
C2orf88-201ENST00000340623 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
C2orf88-201ENST00000340623 F13A1P00488 732 aa13.52□□□□□ -0.24
C2orf88-201ENST00000340623 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.24
C2orf88-201ENST00000340623 ALX1Q15699 326 aa13.52□□□□□ -0.24
C2orf88-201ENST00000340623 GRIK5Q16478 980 aa13.52□□□□□ -0.24
C2orf88-201ENST00000340623 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.24
C2orf88-201ENST00000340623 FANCBQ8NB91 859 aa13.52□□□□□ -0.24
C2orf88-201ENST00000340623 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.24
C2orf88-201ENST00000340623 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.25
C2orf88-201ENST00000340623 DCAF15Q66K64 600 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 SH2D4AQ9H788 454 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 DNM1Q05193 864 aaKnown RBP13.52□□□□□ -0.25
C2orf88-201ENST00000340623 SCRN1Q12765 414 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 CUL5Q93034 780 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 HOOK2Q96ED9 719 aa13.52□□□□□ -0.25
C2orf88-201ENST00000340623 SCAND2PQ9GZW5 306 aaPredicted RBP13.52□□□□□ -0.25
C2orf88-201ENST00000340623 ARFGEF2Q9Y6D5 1785 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 NMT2O60551 498 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 CCDC43Q96MW1 224 aaKnown RBP13.51□□□□□ -0.25
C2orf88-201ENST00000340623 PFKFB2O60825 505 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 SPC24Q8NBT2 197 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 FLT1P17948 1338 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 SH2B2O14492 632 aaPredicted RBP13.51□□□□□ -0.25
C2orf88-201ENST00000340623 TXLNAP40222 546 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 PLS1Q14651 629 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 TMED8Q6PL24 325 aaPredicted RBP13.51□□□□□ -0.25
C2orf88-201ENST00000340623 KIF2CQ99661 725 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 TANGO6Q9C0B7 1094 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
C2orf88-201ENST00000340623 KIF4BQ2VIQ3 1234 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 CCDC148Q8NFR7 591 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 CDK5RAP3Q96JB5 506 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
C2orf88-201ENST00000340623 UBA5Q9GZZ9 404 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
C2orf88-201ENST00000340623 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 DEXIO95424 95 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 LMNB1P20700 586 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 HHIPL2Q6UWX4 724 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
C2orf88-201ENST00000340623 LAMB4A4D0S4 1761 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 C4BP0C0L5 1744 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 PPP1R12BO60237 982 aaPredicted RBP13.5□□□□□ -0.25
C2orf88-201ENST00000340623 TOP1P11387 765 aaKnown RBP13.5□□□□□ -0.25
C2orf88-201ENST00000340623 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
C2orf88-201ENST00000340623 KCNJ14Q9UNX9 436 aa13.5□□□□□ -0.25
C2orf88-201ENST00000340623 BECN2A8MW95 431 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 PLCD1P51178 756 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 CSADQ9Y600 493 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 GH2P01242 217 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 NFIAQ12857 509 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 SASS6Q6UVJ0 657 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 CPXCR1Q8N123 301 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 VPS54Q9P1Q0 977 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 HOOK1Q9UJC3 728 aaKnown RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 CLSTN1O94985 981 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
C2orf88-201ENST00000340623 MB21D2Q8IYB1 491 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-201ENST00000340623 PRAMEF18Q5VWM3 479 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 FAM205AQ6ZU69 1335 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 TCRBV5S4A2TA0A5A2 114 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 CEP131Q9UPN4 1083 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 RASA3Q14644 834 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 C6orf50Q9HD87 102 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 DACT2Q5SW24 774 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 RTFDC1Q9BY42 306 aaPredicted RBP13.48□□□□□ -0.25
C2orf88-201ENST00000340623 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 SERPINA10Q9UK55 444 aa13.48□□□□□ -0.25
C2orf88-201ENST00000340623 ESPNB1AK53 854 aa13.47□□□□□ -0.25
C2orf88-201ENST00000340623 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms