RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SGMS1Q86VZ5 419 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 MB21D2Q8IYB1 491 aaPredicted RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 V9GY48 417 aaPredicted RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 BICDL2A1A5D9 508 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 BIN1O00499 593 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 GRIPAP1Q4V328 841 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 UBASH3AP57075 661 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 MFSD14BQ5SR56 506 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 TMC6Q7Z403 805 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 MARCH10Q8NA82 808 aaPredicted RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 SERPINB2P05120 415 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 NLRP12P59046 1061 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 RBM6P78332 1123 aaKnown RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 KRT79Q5XKE5 535 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 SEPT12Q8IYM1 358 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 CCDC17Q96LX7 622 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 EXOC1Q9NV70 894 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 ZNF202O95125 648 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 SSBP05455 408 aaKnown RBP eCLIP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 TFAP4Q01664 338 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 DGKHQ86XP1 1220 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 ANKRD62A6NC57 917 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 NONOQ15233 471 aaKnown RBP eCLIP8.61□□□□□ -1.03
HIPK1-201ENST00000340480 RRAGBQ5VZM2 374 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 TEKT1Q969V4 418 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 TANGO6Q9C0B7 1094 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
HIPK1-201ENST00000340480 A0A1B0GVL5 298 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 TNNI2P48788 182 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 FAM173BQ6P4H8 233 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 SWAP70Q9UH65 585 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 RXRAP19793 462 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 NOLC1Q14978 699 aaKnown RBP eCLIP8.61□□□□□ -1.03
HIPK1-201ENST00000340480 KLHL10Q6JEL2 608 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 CCDC186Q7Z3E2 898 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 EHBP1Q8NDI1 1231 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 ZKSCAN3Q9BRR0 538 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 MAGEF1Q9HAY2 307 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 UQCRHLA0A096LP55 91 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 UQCRHP07919 91 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 EXOSC10Q01780 885 aaKnown RBP8.61□□□□□ -1.03
HIPK1-201ENST00000340480 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
HIPK1-201ENST00000340480 HOOK2Q96ED9 719 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 FAM208AQ9UK61 1670 aaKnown RBP8.61□□□□□ -1.03
HIPK1-201ENST00000340480 ERLIN1O75477 346 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 DEF6Q9H4E7 631 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 LMO7Q8WWI1 1683 aa8.61□□□□□ -1.03
HIPK1-201ENST00000340480 LAD1O00515 517 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 NTSR2O95665 410 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 TUBB4BP68371 445 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 KIAA1468Q9P260 1216 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 DYNC1I1O14576 645 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 LARGE1O95461 756 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 SCG2P13521 617 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 GBP2P32456 591 aaPredicted RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 TRIM14Q14142 442 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 IQCDQ96DY2 449 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 MINPP1Q9UNW1 487 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 CLEC11AQ9Y240 323 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 KIF5CO60282 957 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PRDM1O75626 825 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PICALMQ13492 652 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 LCORLQ8N3X6 602 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 FEZ1Q99689 392 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 SUGT1Q9Y2Z0 365 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 TDRD7Q8NHU6 1098 aaKnown RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PHKBQ93100 1093 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 DHX58Q96C10 678 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 HOMER2Q9NSB8 354 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 SKILP12757 684 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 TNNT1P13805 278 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PDS5AQ29RF7 1337 aaKnown RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PRPF3O43395 683 aaKnown RBP8.6□□□□□ -1.03
HIPK1-201ENST00000340480 ZNF75DP51815 510 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 SLC10A5Q5PT55 438 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 PI16Q6UXB8 463 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 COA1Q9GZY4 146 aa8.6□□□□□ -1.03
HIPK1-201ENST00000340480 N4BP3O15049 544 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 NPR1P16066 1061 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 VPS36Q86VN1 386 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 TRIM47Q96LD4 638 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 PCDHA7Q9UN72 937 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 AFF2P51816 1311 aa8.59□□□□□ -1.03
HIPK1-201ENST00000340480 LINC00301Q8NCQ3 95 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms