RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 YDJCA8MPS7 323 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
LST1-203ENST00000339530 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
LST1-203ENST00000339530 HLA-DOAP06340 250 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 RTN1Q16799 776 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 APOBEC3HQ6NTF7 200 aaKnown RBP12.93□□□□□ -0.34
LST1-203ENST00000339530 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
LST1-203ENST00000339530 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
LST1-203ENST00000339530 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 WASF1Q92558 559 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 ANKS1AQ92625 1134 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 MAP3K14Q99558 947 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 IDI2Q9BXS1 227 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 OSBPL5Q9H0X9 879 aaPredicted RBP12.93□□□□□ -0.34
LST1-203ENST00000339530 EHD4Q9H223 541 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
LST1-203ENST00000339530 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
LST1-203ENST00000339530 IFNAR1P17181 557 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 CDC37L1Q7L3B6 337 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 ZNF444Q8N0Y2 327 aaPredicted RBP12.92□□□□□ -0.34
LST1-203ENST00000339530 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 AGBL3Q8NEM8 1001 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
LST1-203ENST00000339530 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
LST1-203ENST00000339530 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
LST1-203ENST00000339530 TRAK2O60296 914 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 PRDM1O75626 825 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 MBD3O95983 291 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 SCNN1DP51172 638 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 GABPAQ06546 454 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 NTRK3Q16288 839 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
LST1-203ENST00000339530 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 STK11IPQ8N1F8 1099 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
LST1-203ENST00000339530 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
LST1-203ENST00000339530 LMBRD1Q9NUN5 540 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
LST1-203ENST00000339530 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 ENTPD3O75355 529 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 TSPY3P0CV98 308 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 TSPY8P0CW00 308 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 FDPSP14324 419 aaKnown RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 RASA1P20936 1047 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 CDC27P30260 824 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 CDK8P49336 464 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 PLCD1P51178 756 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 KRT85P78386 507 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 TFAP4Q01664 338 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 SSRP1Q08945 709 aaKnown RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 RESTQ13127 1097 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 FANCBQ8NB91 859 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 MTMR14Q8NCE2 650 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 C8orf76Q96K31 380 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 GMLQ99445 158 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 RNF26Q9BY78 433 aaPredicted RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 KCNQ5Q9NR82 932 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
LST1-203ENST00000339530 ATRNL1Q5VV63 1379 aa12.9□□□□□ -0.34
LST1-203ENST00000339530 PSMD14O00487 310 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 DEXIO95424 95 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 KIF5BP33176 963 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 ADD1P35611 737 aaKnown RBP12.89□□□□□ -0.35
LST1-203ENST00000339530 PICALMQ13492 652 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 OGFOD1Q8N543 542 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
LST1-203ENST00000339530 JDP2Q8WYK2 163 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 DYNLL2Q96FJ2 89 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
LST1-203ENST00000339530 TMOD2Q9NZR1 351 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
LST1-203ENST00000339530 ELP1O95163 1332 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 NFKBIEO00221 500 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
LST1-203ENST00000339530 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
LST1-203ENST00000339530 NOVP48745 357 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms