RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 BAG3O95817 575 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 ALDH1B1P30837 517 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 EARS2Q5JPH6 523 aaKnown RBP8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 TEX11Q8IYF3 940 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 SRBD1Q8N5C6 995 aaKnown RBP8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 CPVLQ9H3G5 476 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 DDX4Q9NQI0 724 aaKnown RBP8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 VPS54Q9P1Q0 977 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 ARPP21Q9UBL0 812 aaPredicted RBP8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 MRVI1Q9Y6F6 885 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 DUOX1Q9NRD9 1551 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 ORC4O43929 436 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 CDKL5O76039 1030 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 ATP2B1P20020 1258 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 CACNB3P54284 484 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 SF3A1Q15459 793 aaKnown RBP8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 CPLX2Q6PUV4 134 aaKnown RBP8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 TMTC2Q8N394 836 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 CLIC6Q96NY7 704 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 NUP62CLQ9H1M0 184 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 MKNK2Q9HBH9 465 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 RTEL1Q9NZ71 1219 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 TTF2Q9UNY4 1162 aaKnown RBP8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 CCDC88AQ3V6T2 1871 aa8.59□□□□□ -1.04
SRFBP1-201ENST00000339397 FLT1P17948 1338 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 TOB1P50616 345 aaPredicted RBP8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 PDE4BQ07343 736 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 SPECC1Q5M775 1068 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 FLAD1Q8NFF5 587 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 ZNF396Q96N95 335 aaPredicted RBP8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 TNMDQ9H2S6 317 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 RRAGDQ9NQL2 400 aaPredicted RBP8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 H0YIN7 160 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 WNT7AO00755 349 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 AP5Z1O43299 807 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 RASA1P20936 1047 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 NDUFA8P51970 172 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 GSTO1P78417 241 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 GRIN1Q05586 938 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 STK38Q15208 465 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 ANO1Q5XXA6 986 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 CATIPQ7Z7H3 387 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 CLEC10AQ8IUN9 316 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 ZFPM1Q8IX07 1006 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 DIS3L2Q8IYB7 885 aaKnown RBP8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 FSIP1Q8NA03 581 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 COA1Q9GZY4 146 aa8.58□□□□□ -1.04
SRFBP1-201ENST00000339397 SPTLC2O15270 562 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 LDHCP07864 332 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 U2AF2P26368 475 aaKnown RBP eCLIP8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 CDK8P49336 464 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 NFIAQ12857 509 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 GNL2Q13823 731 aaKnown RBP8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 SLC35G1Q2M3R5 365 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 AXDND1Q5T1B0 1012 aaPredicted RBP8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 ENGASEQ8NFI3 743 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 MAP3K14Q99558 947 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 STX8Q9UNK0 236 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 COL11A2P13942 1736 aaPredicted RBP8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 LTBP1Q14766 1721 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 SLX4Q8IY92 1834 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 FAM205AQ6ZU69 1335 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 G3V3G9 751 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 C21orf2O43822 256 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 MMP1P03956 469 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 GOLGA8HP0CJ92 632 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 AOC3Q16853 763 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 TRIM22Q8IYM9 498 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 NOL10Q9BSC4 688 aaKnown RBP8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 USP25Q9UHP3 1055 aa8.57□□□□□ -1.04
SRFBP1-201ENST00000339397 TSPY3P0CV98 308 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 TSPY8P0CW00 308 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 TYRO3Q06418 890 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 PTPAQ15257 358 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 SHROOM1Q2M3G4 852 aaPredicted RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 APOBEC3HQ6NTF7 200 aaKnown RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 BRAPQ7Z569 592 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 FAM163AQ96GL9 167 aaPredicted RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 CLSTN2Q9H4D0 955 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 CABP5Q9NP86 173 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 PCDHB6Q9Y5E3 794 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 GAKO14976 1311 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 CCDC196A0A1B0GTZ2 297 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 FAM196BA6NMK8 535 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 DEXIO95424 95 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 SLC3A2P08195 630 aaKnown RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 TRIM29Q14134 588 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 ADALQ6DHV7 355 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 TMTC3Q6ZXV5 915 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 NOSTRINQ8IVI9 506 aa8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
SRFBP1-201ENST00000339397 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 371.1 ms