RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 TSPY3P0CV98 308 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 TSPY8P0CW00 308 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 LIFRP42702 1097 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 TOB2Q14106 344 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 TMTC2Q8N394 836 aa17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 TAF1DQ9H5J8 278 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
NIPAL3-202ENST00000339255 IFIT3O14879 490 aaKnown RBP17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 SHMT1P34896 483 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 EVCP57679 992 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 PPP4R3BQ5MIZ7 849 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 BRF1Q92994 677 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 PGAP2Q9UHJ9 254 aa17.09■□□□□ 0.33
NIPAL3-202ENST00000339255 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 TFAP4Q01664 338 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 SGMS1Q86VZ5 419 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 SULF1Q8IWU6 871 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 TEPSINQ96N21 525 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 DNAJC18Q9H819 358 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 ATAD5Q96QE3 1844 aa17.08■□□□□ 0.32
NIPAL3-202ENST00000339255 TNKSO95271 1327 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 NEDD1Q8NHV4 660 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 WTAPQ15007 396 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 FAM47AQ5JRC9 791 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 DCAF15Q66K64 600 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
NIPAL3-202ENST00000339255 RCAN1P53805 252 aa17.06■□□□□ 0.32
NIPAL3-202ENST00000339255 SEC23AQ15436 765 aa17.06■□□□□ 0.32
NIPAL3-202ENST00000339255 CERKLQ49MI3 558 aaPredicted RBP17.06■□□□□ 0.32
NIPAL3-202ENST00000339255 DGKHQ86XP1 1220 aa17.06■□□□□ 0.32
NIPAL3-202ENST00000339255 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
NIPAL3-202ENST00000339255 POTECB2RU33 542 aa17.05■□□□□ 0.32
NIPAL3-202ENST00000339255 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
NIPAL3-202ENST00000339255 IFIT1BQ5T764 474 aaKnown RBP17.05■□□□□ 0.32
NIPAL3-202ENST00000339255 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
NIPAL3-202ENST00000339255 TPCN1Q9ULQ1 816 aa17.05■□□□□ 0.32
NIPAL3-202ENST00000339255 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 TMEM179Q6ZVK1 233 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 ANKS1AQ92625 1134 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 DOCK1Q14185 1865 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 KLF18A0A0U1RQI7 1052 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 FAM196BA6NMK8 535 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 CDAN1Q8IWY9 1227 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
NIPAL3-202ENST00000339255 AKR1B1P15121 316 aa17.03■□□□□ 0.32
NIPAL3-202ENST00000339255 INTS4Q96HW7 963 aaKnown RBP17.03■□□□□ 0.32
NIPAL3-202ENST00000339255 SLKQ9H2G2 1235 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-202ENST00000339255 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
NIPAL3-202ENST00000339255 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
NIPAL3-202ENST00000339255 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
NIPAL3-202ENST00000339255 NID2Q14112 1375 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 IGKV6D-41A0A0C4DH26 115 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 NMT2O60551 498 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 CALM1P0DP23 149 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 CALM2P0DP24 149 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 CALM3P0DP25 149 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 NOVP48745 357 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 CUL4AQ13619 759 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 ME3Q16798 604 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 NBPF12Q5TAG4 269 aaPredicted RBP17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 MTMR4Q9NYA4 1195 aa17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 SCAF8Q9UPN6 1271 aaKnown RBP17.02■□□□□ 0.32
NIPAL3-202ENST00000339255 ZBTB43O43298 467 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 PFKFB2O60825 505 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 DDAH1O94760 285 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms