RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 WDR93Q6P2C0 686 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 MICALL1Q8N3F8 863 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 ADD3Q9UEY8 706 aaKnown RBP23.1■■□□□ 1.29
RUNX3-202ENST00000338888 BTBD18B2RXH4 712 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 RANBP6O60518 1105 aaKnown RBP23.1■■□□□ 1.29
RUNX3-202ENST00000338888 ERCC5P28715 1186 aaPredicted RBP23.1■■□□□ 1.29
RUNX3-202ENST00000338888 PBX1P40424 430 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 APOA5Q6Q788 366 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 TRIML1Q8N9V2 468 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 GDAP1L1Q96MZ0 367 aa23.1■■□□□ 1.29
RUNX3-202ENST00000338888 FBXO2Q9UK22 296 aaPredicted RBP23.1■■□□□ 1.29
RUNX3-202ENST00000338888 ALS2Q96Q42 1657 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 PRPF6O94906 941 aaKnown RBP23.09■■□□□ 1.29
RUNX3-202ENST00000338888 GYPCP04921 128 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 TOB1P50616 345 aaPredicted RBP23.09■■□□□ 1.29
RUNX3-202ENST00000338888 USP49Q70CQ1 688 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 TADA2BQ86TJ2 420 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 CCDC148Q8NFR7 591 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 PUS3Q9BZE2 481 aaKnown RBP23.09■■□□□ 1.29
RUNX3-202ENST00000338888 SLAIN2Q9P270 581 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 ERVK-24P63145 666 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
RUNX3-202ENST00000338888 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 RGPD5Q99666 1765 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 EYA2O00167 538 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 CD44P16070 742 aaKnown RBP23.08■■□□□ 1.29
RUNX3-202ENST00000338888 PTPREP23469 700 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 ARHGAP25P42331 645 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 SPATA1Q5VX52 437 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 NOSTRINQ8IVI9 506 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 SLC26A6Q9BXS9 759 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 NBPF3Q9H094 633 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 C4AP0C0L4 1744 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 C4BP0C0L5 1744 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
RUNX3-202ENST00000338888 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.29
RUNX3-202ENST00000338888 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.28
RUNX3-202ENST00000338888 GPAA1O43292 621 aa23.08■■□□□ 1.28
RUNX3-202ENST00000338888 CNGA4Q8IV77 575 aa23.08■■□□□ 1.28
RUNX3-202ENST00000338888 NCAPGQ9BPX3 1015 aa23.08■■□□□ 1.28
RUNX3-202ENST00000338888 SH2B2O14492 632 aaPredicted RBP23.07■■□□□ 1.28
RUNX3-202ENST00000338888 AARSP49588 968 aaKnown RBP eCLIP23.07■■□□□ 1.28
RUNX3-202ENST00000338888 AMPD2Q01433 879 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 NTRK3Q16288 839 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 NFXL1Q6ZNB6 911 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 SLF1Q9BQI6 1058 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 ZBTB43O43298 467 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 ACTN4O43707 911 aaKnown RBP23.07■■□□□ 1.28
RUNX3-202ENST00000338888 CASP1P29466 404 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 ADORA1P30542 326 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 APPBP2Q92624 585 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 VIPAS39Q9H9C1 493 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 SLC52A2Q9HAB3 445 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 WDR19Q8NEZ3 1342 aa23.07■■□□□ 1.28
RUNX3-202ENST00000338888 XIRP1Q702N8 1843 aaKnown RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 A0A087WUV0 522 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 COBLO75128 1261 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 CPP00450 1065 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 CDC25AP30304 524 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 SCARF1Q14162 830 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 FILIP1LQ4L180 1135 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 TBC1D10CQ8IV04 446 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 SMYD4Q8IYR2 804 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 CTCFLQ8NI51 663 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 SMARCC1Q92922 1105 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 HPCAL4Q9UM19 191 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 KCNJ14Q9UNX9 436 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 RNF225M0QZC1 329 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 ZFYP08048 801 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 CCT6AP40227 531 aaKnown RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 AFMP43652 599 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 GPATCH11Q8N954 259 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 MYCBPQ99417 103 aaPredicted RBP23.06■■□□□ 1.28
RUNX3-202ENST00000338888 SYNRGQ9UMZ2 1314 aa23.06■■□□□ 1.28
RUNX3-202ENST00000338888 GOLGA8AA7E2F4 631 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 B4E1Z4 1266 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 ENC1O14682 589 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 PI16Q6UXB8 463 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 TMTC1Q8IUR5 882 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 FAM217BQ9NTX9 383 aaPredicted RBP23.05■■□□□ 1.28
RUNX3-202ENST00000338888 TRIM10Q9UDY6 481 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 PCDHB6Q9Y5E3 794 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 C5P01031 1676 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 H7C1W4 665 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 ZMYND10O75800 440 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 ZAP70P43403 619 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 USP14P54578 494 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 MMS22LQ6ZRQ5 1243 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 DIS3L2Q8IYB7 885 aaKnown RBP23.05■■□□□ 1.28
RUNX3-202ENST00000338888 SPATA20Q8TB22 786 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 HDAC6Q9UBN7 1215 aa23.05■■□□□ 1.28
RUNX3-202ENST00000338888 GUCY1A2P33402 732 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 RAPGEF4Q8WZA2 1011 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 GUCA1BQ9UMX6 200 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 AFDNP55196 1824 aaKnown RBP23.04■■□□□ 1.28
RUNX3-202ENST00000338888 SNRPA1P09661 255 aaKnown RBP23.04■■□□□ 1.28
RUNX3-202ENST00000338888 STIM1Q13586 685 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 CDKAL1Q5VV42 579 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 KANK3Q6NY19 840 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 SUGP1Q8IWZ8 645 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms