RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 VWA3BQ502W6 1294 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 TMC4Q7Z404 712 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 LUC7L2Q9Y383 392 aaKnown RBP8.65□□□□□ -1.02
TRIM2-201ENST00000338700 ATP6V0A2Q9Y487 856 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 CEP170BQ9Y4F5 1589 aaPredicted RBP8.65□□□□□ -1.02
TRIM2-201ENST00000338700 KDRP35968 1356 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 ZAP70P43403 619 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 BMS1Q14692 1282 aaKnown RBP8.65□□□□□ -1.02
TRIM2-201ENST00000338700 C6orf163Q5TEZ5 329 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 TICAM2Q86XR7 235 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 USP40Q9NVE5 1235 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 DNAI1Q9UI46 699 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 TTC38Q5R3I4 469 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 ANO1Q5XXA6 986 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 RTKN2Q8IZC4 609 aa8.65□□□□□ -1.02
TRIM2-201ENST00000338700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRIM2-201ENST00000338700 CEP152O94986 1710 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 TXKP42681 527 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 FAM160A1Q05DH4 1040 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 TRPC3Q13507 836 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 NSRP1Q9H0G5 558 aaKnown RBP8.65□□□□□ -1.03
TRIM2-201ENST00000338700 SNX14Q9Y5W7 946 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 ATP7BP35670 1465 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 DNM2P50570 870 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 SNX16P57768 344 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 CCDC14Q49A88 953 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 CNGA4Q8IV77 575 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 NOC4LQ9BVI4 516 aaKnown RBP8.65□□□□□ -1.03
TRIM2-201ENST00000338700 SRRTQ9BXP5 876 aaKnown RBP8.65□□□□□ -1.03
TRIM2-201ENST00000338700 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.03
TRIM2-201ENST00000338700 PALLDQ8WX93 1383 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 PRDM1O75626 825 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 ARL1P40616 181 aaPredicted RBP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 KIAA1524Q8TCG1 905 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 FAM227BQ96M60 508 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 PAIP2Q9BPZ3 127 aaKnown RBP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 SLC5A4Q9NY91 659 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 M0QZ92 97 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 CUTAO60888 179 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 MMP10P09238 476 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 ATP2A2P16615 1042 aaKnown RBP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 TUBB4BP68371 445 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 MYL5Q02045 173 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 USH1GQ495M9 461 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 DCAF15Q66K64 600 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 CC2D2BQ6DHV5 1058 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 CEP63Q96MT8 703 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 TRIM6Q9C030 488 aaPredicted RBP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 GAS8O95995 478 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 GTF2IP78347 998 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 ARMC9Q7Z3E5 817 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 GOLGA1Q92805 767 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 MTUS1Q9ULD2 1270 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 ERBB4Q15303 1308 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 TRIM14Q14142 442 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 TXNRD1Q16881 649 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 SEL1L2Q5TEA6 688 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 CPXCR1Q8N123 301 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 CHURC1Q8WUH1 139 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 IFNKQ9P0W0 207 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 A0A1B0GVL5 298 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 SMCR8Q8TEV9 937 aaPredicted RBP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 DSCC1Q9BVC3 393 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 DNM3Q9UQ16 869 aa8.64□□□□□ -1.03
TRIM2-201ENST00000338700 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRIM2-201ENST00000338700 SGSM2O43147 1006 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 OPA1O60313 960 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 CPA1P15085 419 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 ATP5JP18859 108 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 PABPC4Q13310 644 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 ZBTB38Q8NAP3 1195 aaPredicted RBP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 CDC42BPBQ9Y5S2 1711 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 DDX39AO00148 427 aaKnown RBP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 IL6STP40189 918 aaPredicted RBP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 CALCRLQ16602 461 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 MFSD14BQ5SR56 506 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 DIS3L2Q8IYB7 885 aaKnown RBP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 TNFAIP3P21580 790 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 TFAP4Q01664 338 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 PPARAQ07869 468 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 NSMFQ6X4W1 530 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 TXNDC16Q9P2K2 825 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 LRWD1Q9UFC0 647 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 KCNH3Q9ULD8 1083 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 GUCA1BQ9UMX6 200 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 PNMA6EA0A0J9YXQ4 647 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 NDC80O14777 642 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 NLRX1Q86UT6 975 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 JAKMIP2Q96AA8 810 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 RNF216Q9NWF9 866 aaPredicted RBP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 KCNG1Q9UIX4 513 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 CETN3O15182 167 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 GIGYF1O75420 1035 aaPredicted RBP8.63□□□□□ -1.03
TRIM2-201ENST00000338700 LIN9Q5TKA1 542 aa8.63□□□□□ -1.03
TRIM2-201ENST00000338700 ERBB3P21860 1342 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms