RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 B4GALNT4Q76KP1 1039 aa12.47□□□□□ -0.41
SEC23B-202ENST00000336714 TSEN2Q8NCE0 465 aaKnown RBP12.47□□□□□ -0.41
SEC23B-202ENST00000336714 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
SEC23B-202ENST00000336714 SPDL1Q96EA4 605 aa12.47□□□□□ -0.41
SEC23B-202ENST00000336714 MYL6BP14649 208 aa12.47□□□□□ -0.41
SEC23B-202ENST00000336714 RNASE9P60153 205 aaKnown RBP12.47□□□□□ -0.41
SEC23B-202ENST00000336714 SNX1Q13596 522 aa12.47□□□□□ -0.41
SEC23B-202ENST00000336714 NR1I3Q14994 352 aa12.47□□□□□ -0.41
SEC23B-202ENST00000336714 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
SEC23B-202ENST00000336714 RNPC3Q96LT9 517 aaKnown RBP12.47□□□□□ -0.41
SEC23B-202ENST00000336714 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
SEC23B-202ENST00000336714 ZC3H4Q9UPT8 1303 aaKnown RBP12.47□□□□□ -0.41
SEC23B-202ENST00000336714 SBNO1A3KN83 1393 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 ARHGAP25P42331 645 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 ACCSLQ4AC99 568 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 FILIP1LQ4L180 1135 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 TTMPQ5BVD1 217 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 WDR93Q6P2C0 686 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 RASGRP2Q7LDG7 609 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 PLCD4Q9BRC7 762 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 A0A1B0GUA9 196 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 PRC1O43663 620 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 KIF4AO95239 1232 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 CYP27A1Q02318 531 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 SEMA3FQ13275 785 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 NNTQ13423 1086 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 SNCBQ16143 134 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 NAA35Q5VZE5 725 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 LRRC1Q9BTT6 524 aa12.46□□□□□ -0.41
SEC23B-202ENST00000336714 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
SEC23B-202ENST00000336714 ASXL2Q76L83 1435 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 PTPRMP28827 1452 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 SHOX2O60902 331 aaPredicted RBP12.46□□□□□ -0.42
SEC23B-202ENST00000336714 RAPGEF3O95398 923 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 IDEP14735 1019 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.42
SEC23B-202ENST00000336714 KRT40Q6A162 431 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.42
SEC23B-202ENST00000336714 CCDC121Q6ZUS5 278 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 PARD3BQ8TEW8 1205 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 PANX2Q96RD6 677 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 WWC3Q9ULE0 1092 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 CPS1P31327 1500 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.42
SEC23B-202ENST00000336714 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 PREX1Q8TCU6 1659 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 HSF2BPO75031 334 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 ZNF18P17022 549 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 FKBP4Q02790 459 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC23B-202ENST00000336714 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 USPL1Q5W0Q7 1092 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 BRAPQ7Z569 592 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 FMNL3Q8IVF7 1028 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 CMTR1Q8N1G2 835 aaKnown RBP12.45□□□□□ -0.42
SEC23B-202ENST00000336714 TACO1Q9BSH4 297 aaKnown RBP12.45□□□□□ -0.42
SEC23B-202ENST00000336714 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 AGLP35573 1532 aa12.45□□□□□ -0.42
SEC23B-202ENST00000336714 GRM8O00222 908 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 LSP1P33241 339 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 TIMM10P62072 90 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 TBC1D8BQ0IIM8 1120 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 IRAK4Q9NWZ3 460 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 KCNJ14Q9UNX9 436 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 CTNND2Q9UQB3 1225 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 ZSCAN5CA6NGD5 496 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 CALRP27797 417 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 MAATS1Q7Z4T9 603 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 ZNF473Q8WTR7 871 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 KAZALD1Q96I82 304 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 HSPD1P10809 573 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 AMPD2Q01433 879 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 CCDC70Q6NSX1 233 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 RIC3Q7Z5B4 369 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 PNMA8AQ86V59 439 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 CCDC43Q96MW1 224 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 TPX2Q9ULW0 747 aaKnown RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 EPN1Q9Y6I3 576 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-202ENST00000336714 SALL1Q9NSC2 1324 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
SEC23B-202ENST00000336714 HECW2Q9P2P5 1572 aa12.43□□□□□ -0.42
SEC23B-202ENST00000336714 EXOSC10Q01780 885 aaKnown RBP12.43□□□□□ -0.42
SEC23B-202ENST00000336714 TRIM29Q14134 588 aa12.43□□□□□ -0.42
SEC23B-202ENST00000336714 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
SEC23B-202ENST00000336714 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
SEC23B-202ENST00000336714 YIPF3Q9GZM5 350 aa12.43□□□□□ -0.42
SEC23B-202ENST00000336714 BLZF1Q9H2G9 400 aa12.43□□□□□ -0.42
SEC23B-202ENST00000336714 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms