RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 TOMM22Q9NS69 142 aa16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
APOBEC3B-202ENST00000335760 UNCXA6NJT0 531 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 RASA1P20936 1047 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 JAG1P78504 1218 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 RRP12Q5JTH9 1297 aaKnown RBP16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 NOL9Q5SY16 702 aaKnown RBP16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 RNF20Q5VTR2 975 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 SLC10A4Q96EP9 437 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 ELP3Q9H9T3 547 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 PICK1Q9NRD5 415 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 TAF6LQ9Y6J9 622 aa16.69■□□□□ 0.26
APOBEC3B-202ENST00000335760 DOCK1Q14185 1865 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 ORC4O43929 436 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 GH2P01242 217 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 FGRP09769 529 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 AKR1B1P15121 316 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 CABP5Q9NP86 173 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 NEDD4P46934 1319 aa16.68■□□□□ 0.26
APOBEC3B-202ENST00000335760 E7EWF7 191 aa16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 RANBP6O60518 1105 aaKnown RBP16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 HSPA4P34932 840 aa16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 FAM47AQ5JRC9 791 aa16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 RGMBQ6NW40 437 aa16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
APOBEC3B-202ENST00000335760 ASNSP08243 561 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 HSPA6P17066 643 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 PTPRAP18433 802 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 MCCP23508 829 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 ZNF157P51786 506 aaPredicted RBP16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 HTRA3P83110 453 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 TFAP4Q01664 338 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 CNNM2Q9H8M5 875 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
APOBEC3B-202ENST00000335760 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 B4E1Z4 1266 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 TSPY3P0CV98 308 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 TSPY8P0CW00 308 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 TRDNQ13061 729 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 SEPT2Q15019 361 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 CCDC84Q86UT8 332 aaPredicted RBP16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 ESR2Q92731 530 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 KCNB2Q92953 911 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 HHIPL1Q96JK4 782 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 KRT23Q9C075 422 aa16.65■□□□□ 0.26
APOBEC3B-202ENST00000335760 USP17L5A8MUK1 530 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 GUCY1A2P33402 732 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 ERO1BQ86YB8 467 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 OTUD5Q96G74 571 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 BACH2Q9BYV9 841 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.26
APOBEC3B-202ENST00000335760 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 KDM4AO75164 1064 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 ZHX2Q9Y6X8 837 aa16.64■□□□□ 0.25
APOBEC3B-202ENST00000335760 SLC10A3P09131 477 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 NT5C2P49902 561 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 PPATQ06203 517 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 GRM1Q13255 1194 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 KRT32Q14532 448 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 CCDC102AQ96A19 550 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
APOBEC3B-202ENST00000335760 PLIN4Q96Q06 1357 aa16.62■□□□□ 0.25
APOBEC3B-202ENST00000335760 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3B-202ENST00000335760 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
APOBEC3B-202ENST00000335760 GJA5P36382 358 aa16.62■□□□□ 0.25
APOBEC3B-202ENST00000335760 PPIL2Q13356 520 aa16.62■□□□□ 0.25
APOBEC3B-202ENST00000335760 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
APOBEC3B-202ENST00000335760 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms