RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
CCDC172-201ENST00000333254 FANCCQ00597 558 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 FCHSD1Q86WN1 690 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 MLKLQ8NB16 471 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
CCDC172-201ENST00000333254 ZSCAN10Q96SZ4 725 aaPredicted RBP12.34□□□□□ -0.43
CCDC172-201ENST00000333254 ANKRD2Q9GZV1 360 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 INCENPQ9NQS7 918 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 MINPP1Q9UNW1 487 aa12.34□□□□□ -0.43
CCDC172-201ENST00000333254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC172-201ENST00000333254 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.43
CCDC172-201ENST00000333254 A0A087WWV3 80 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 SFPQP23246 707 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC172-201ENST00000333254 GUCY1A2P33402 732 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 PTPN14Q15678 1187 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 SBK1Q52WX2 424 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 RRP12Q5JTH9 1297 aaKnown RBP12.33□□□□□ -0.44
CCDC172-201ENST00000333254 CEP135Q66GS9 1140 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 IQCA1Q86XH1 822 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 ACSBG1Q96GR2 724 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 FAM84BQ96KN1 310 aaPredicted RBP12.33□□□□□ -0.44
CCDC172-201ENST00000333254 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC172-201ENST00000333254 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
CCDC172-201ENST00000333254 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 SMC2O95347 1197 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 AKAP17AQ02040 695 aaKnown RBP12.32□□□□□ -0.44
CCDC172-201ENST00000333254 PNOCQ13519 176 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 POSTNQ15063 836 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 CATIPQ7Z7H3 387 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 FAM177A1Q8N128 213 aaPredicted RBP12.32□□□□□ -0.44
CCDC172-201ENST00000333254 ENAHQ8N8S7 591 aaPredicted RBP12.32□□□□□ -0.44
CCDC172-201ENST00000333254 MIGA1Q8NAN2 632 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 NARFQ9UHQ1 456 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 BIN1O00499 593 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 TROAPQ12815 778 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 ARID5BQ14865 1188 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 PKN1Q16512 942 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
CCDC172-201ENST00000333254 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
CCDC172-201ENST00000333254 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 TRIM75PA6NK02 468 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 ACTN4O43707 911 aaKnown RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 ERCC5P28715 1186 aaPredicted RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 KRT2P35908 639 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 GYG1P46976 350 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 MORC3Q14149 939 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 TMTC3Q6ZXV5 915 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 FOXP4Q8IVH2 680 aaPredicted RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 KIF18AQ8NI77 898 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 SDR42E1Q8WUS8 393 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 ABCF2Q9UG63 623 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
CCDC172-201ENST00000333254 TNRC6CQ9HCJ0 1690 aaKnown RBP12.31□□□□□ -0.44
CCDC172-201ENST00000333254 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 MINDY4BA8MYZ0 360 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 ZNF18P17022 549 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 LMOD1P29536 600 aaPredicted RBP12.3□□□□□ -0.44
CCDC172-201ENST00000333254 UBASH3AP57075 661 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 NCBP1Q09161 790 aaKnown RBP12.3□□□□□ -0.44
CCDC172-201ENST00000333254 IFIT1BQ5T764 474 aaKnown RBP12.3□□□□□ -0.44
CCDC172-201ENST00000333254 E4F1Q66K89 784 aaPredicted RBP12.3□□□□□ -0.44
CCDC172-201ENST00000333254 ZNF384Q8TF68 577 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 TNFRSF25Q93038 417 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
CCDC172-201ENST00000333254 MAN1B1Q9UKM7 699 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 CNTNAP5Q8WYK1 1306 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
CCDC172-201ENST00000333254 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 UBE2Q2LH0YL09 131 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
CCDC172-201ENST00000333254 CTR9Q6PD62 1173 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 PDCL2Q8N4E4 241 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 NUP133Q8WUM0 1156 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms