RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 FOXN1O15353 648 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 POLR2DO15514 142 aaKnown RBP10.39□□□□□ -0.75
COPB2-201ENST00000333188 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
COPB2-201ENST00000333188 CDK11BP21127 795 aaKnown RBP10.39□□□□□ -0.75
COPB2-201ENST00000333188 SLC16A2P36021 539 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 USP49Q70CQ1 688 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 NLGN1Q8N2Q7 840 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 EYA3Q99504 573 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 LETM1O95202 739 aaPredicted RBP10.39□□□□□ -0.75
COPB2-201ENST00000333188 PFKFB1P16118 471 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 ERCC3P19447 782 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 AOC3Q16853 763 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 SLC10A5Q5PT55 438 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 LINC00301Q8NCQ3 95 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 BRMS1Q9HCU9 246 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 COL14A1Q05707 1796 aaKnown RBP10.39□□□□□ -0.75
COPB2-201ENST00000333188 PKD1L3Q7Z443 1732 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 CCDC186Q7Z3E2 898 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 STAG1Q8WVM7 1258 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 FAM217BQ9NTX9 383 aaPredicted RBP10.38□□□□□ -0.75
COPB2-201ENST00000333188 LEMD3Q9Y2U8 911 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 PTGS1P23219 599 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 ZSCAN30Q86W11 494 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 SPICE1Q8N0Z3 855 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 ZNF512BQ96KM6 892 aaPredicted RBP10.38□□□□□ -0.75
COPB2-201ENST00000333188 CLSTN2Q9H4D0 955 aa10.38□□□□□ -0.75
COPB2-201ENST00000333188 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
COPB2-201ENST00000333188 SIPA1L3O60292 1781 aaPredicted RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 POLRMTO00411 1230 aaKnown RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 LRMPQ12912 555 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 JAKMIP3Q5VZ66 844 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 FAM200AQ8TCP9 573 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.37□□□□□ -0.75
COPB2-201ENST00000333188 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 DOT1LQ8TEK3 1739 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 PPIP5K2O43314 1243 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 GDF11O95390 407 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 DEXIO95424 95 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 NOSTRINQ8IVI9 506 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 TMTC2Q8N394 836 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 JMYQ8N9B5 988 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 KCNG4Q8TDN1 519 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 WASF1Q92558 559 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.37□□□□□ -0.753e-6■■■■□ 24
COPB2-201ENST00000333188 TCP10L2B9ZVM9 353 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 BBOX1O75936 387 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 NFIAQ12857 509 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 SHROOM1Q2M3G4 852 aaPredicted RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 DPCR1Q3MIW9 517 aa10.37□□□□□ -0.75
COPB2-201ENST00000333188 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
COPB2-201ENST00000333188 ITGB4P16144 1822 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 CCDC194A0A1B0GVG4 234 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 SSBP05455 408 aaKnown RBP eCLIP10.36□□□□□ -0.75
COPB2-201ENST00000333188 GSTO1P78417 241 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 RBM10P98175 930 aaKnown RBP10.36□□□□□ -0.75
COPB2-201ENST00000333188 EARS2Q5JPH6 523 aaKnown RBP10.36□□□□□ -0.75
COPB2-201ENST00000333188 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
COPB2-201ENST00000333188 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 FAM177A1Q8N128 213 aaPredicted RBP10.36□□□□□ -0.75
COPB2-201ENST00000333188 EPSTI1Q96J88 318 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 BLZF1Q9H2G9 400 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 CCDC39Q9UFE4 941 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 RCOR1Q9UKL0 485 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 AP5Z1O43299 807 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 SERPINC1P01008 464 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 NAPAP54920 295 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 ARID5BQ14865 1188 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 LETM2Q2VYF4 491 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 KCTD1Q719H9 257 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 SMYD4Q8IYR2 804 aaPredicted RBP10.36□□□□□ -0.75
COPB2-201ENST00000333188 STK32BQ9NY57 414 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 RFX7Q2KHR2 1363 aa10.36□□□□□ -0.75
COPB2-201ENST00000333188 LIFRP42702 1097 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 CDK8P49336 464 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
COPB2-201ENST00000333188 TDRD3Q9H7E2 651 aaKnown RBP10.35□□□□□ -0.75
COPB2-201ENST00000333188 ZNF277Q9NRM2 450 aaPredicted RBP10.35□□□□□ -0.75
COPB2-201ENST00000333188 ATP8A2Q9NTI2 1148 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 TRIM75PA6NK02 468 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 IFNAR1P17181 557 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 TAL1P17542 331 aaPredicted RBP10.35□□□□□ -0.75
COPB2-201ENST00000333188 GOLGA8FQ08AF8 430 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 GOLGA8DPQ0D2H9 430 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 INF2Q27J81 1249 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 LONRF3Q496Y0 759 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 MIGA2Q7L4E1 593 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 BRAPQ7Z569 592 aa10.35□□□□□ -0.75
COPB2-201ENST00000333188 CCDC84Q86UT8 332 aaPredicted RBP10.35□□□□□ -0.75
COPB2-201ENST00000333188 CPLX3Q8WVH0 158 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms