RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 ZNF213O14771 459 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 CPP00450 1065 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 IFT88Q13099 833 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 RASGRP2Q7LDG7 609 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 JAKMIP2Q96AA8 810 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 SMARCAL1Q9NZC9 954 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 HPS5Q9UPZ3 1129 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 HPSEQ9Y251 543 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 FGAP02671 866 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 PPFIA1Q13136 1202 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 ZNF622Q969S3 477 aaKnown RBP eCLIP23.21■■□□□ 1.31
CMTM4-201ENST00000330687 SENP2Q9HC62 589 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 KDRP35968 1356 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 ZNF18P17022 549 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 PTPN12Q05209 780 aaKnown RBP23.21■■□□□ 1.31
CMTM4-201ENST00000330687 SAFBQ15424 915 aaKnown RBP eCLIP23.21■■□□□ 1.31
CMTM4-201ENST00000330687 BLZF1Q9H2G9 400 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 CXCR5P32302 372 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 GSCP56915 257 aaPredicted RBP23.21■■□□□ 1.31
CMTM4-201ENST00000330687 CNPY4Q8N129 248 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 INCENPQ9NQS7 918 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 ODF2LQ9ULJ1 636 aa23.21■■□□□ 1.31
CMTM4-201ENST00000330687 ZPR1O75312 459 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 ARL8AQ96BM9 186 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 DSCC1Q9BVC3 393 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 AGLP35573 1532 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 SIGLEC1Q9BZZ2 1709 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 SKAP2O75563 359 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-201ENST00000330687 IPO7O95373 1038 aaKnown RBP23.2■■□□□ 1.3
CMTM4-201ENST00000330687 IDEP14735 1019 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 HPDP32754 393 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-201ENST00000330687 TICAM2Q86XR7 235 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 HDAC7Q8WUI4 952 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 ZNF330Q9Y3S2 320 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-201ENST00000330687 HECW2Q9P2P5 1572 aa23.2■■□□□ 1.3
CMTM4-201ENST00000330687 A0A1B0GTH6 734 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 BACH1O14867 736 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 EIF3HO15372 352 aaKnown RBP eCLIP23.19■■□□□ 1.3
CMTM4-201ENST00000330687 GUCY1A3Q02108 690 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 UBXN1Q04323 297 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 GCKRQ14397 625 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 PTPAQ15257 358 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 LRCH2Q5VUJ6 765 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 SEC24CP53992 1094 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 NR5A1Q13285 461 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 KCTD19Q17RG1 926 aaPredicted RBP23.19■■□□□ 1.3
CMTM4-201ENST00000330687 TMTC1Q8IUR5 882 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 ANKRD24Q8TF21 1146 aa23.19■■□□□ 1.3
CMTM4-201ENST00000330687 EPN1Q9Y6I3 576 aaPredicted RBP23.19■■□□□ 1.3
CMTM4-201ENST00000330687 GOLGA8AA7E2F4 631 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 RNF113AO15541 343 aaKnown RBP23.18■■□□□ 1.3
CMTM4-201ENST00000330687 PAX7P23759 505 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 PLCD1P51178 756 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 NAA25Q14CX7 972 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 CYP26C1Q6V0L0 522 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
CMTM4-201ENST00000330687 KRT14P02533 472 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 CD44P16070 742 aaKnown RBP23.18■■□□□ 1.3
CMTM4-201ENST00000330687 NAA15Q9BXJ9 866 aaKnown RBP23.18■■□□□ 1.3
CMTM4-201ENST00000330687 NEURL1BA8MQ27 555 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 B4E1Z4 1266 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 AGPSO00116 658 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 CYP27A1Q02318 531 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 CCDC114Q96M63 670 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 PXDNLA1KZ92 1463 aa23.18■■□□□ 1.3
CMTM4-201ENST00000330687 PPP6R2O75170 966 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 TUBBP07437 444 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 MCM3P25205 808 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 APBA1Q02410 837 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 CEP85LQ5SZL2 805 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 RRAGBQ5VZM2 374 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 PI16Q6UXB8 463 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 PPANQ9NQ55 473 aaKnown RBP23.17■■□□□ 1.3
CMTM4-201ENST00000330687 ABHD10Q9NUJ1 306 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 XRN1Q8IZH2 1706 aaKnown RBP23.17■■□□□ 1.3
CMTM4-201ENST00000330687 IFT81Q8WYA0 676 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 EPSTI1Q96J88 318 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 HELLSQ9NRZ9 838 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 PCDHB6Q9Y5E3 794 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 CLNS1AP54105 237 aaKnown RBP23.17■■□□□ 1.3
CMTM4-201ENST00000330687 NAP1L1P55209 391 aaKnown RBP23.17■■□□□ 1.3
CMTM4-201ENST00000330687 NEDD9Q14511 834 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 WDR93Q6P2C0 686 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 DIS3L2Q8IYB7 885 aaKnown RBP23.17■■□□□ 1.3
CMTM4-201ENST00000330687 NUP133Q8WUM0 1156 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 DUSP10Q9Y6W6 482 aa23.17■■□□□ 1.3
CMTM4-201ENST00000330687 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 hCG_1642624A0A1W2PR95 340 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 ARHGAP25P42331 645 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 ZMYM1Q5SVZ6 1142 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 ZKSCAN3Q9BRR0 538 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 EHD2Q9NZN4 543 aa23.16■■□□□ 1.3
CMTM4-201ENST00000330687 ELF1P32519 619 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 RNASE9P60153 205 aaKnown RBP23.15■■□□□ 1.3
CMTM4-201ENST00000330687 TUBB2AQ13885 445 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 CCDC181Q5TID7 509 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms