RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 CCDC82Q8N4S0 544 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 NPHP1O15259 732 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 DEXIO95424 95 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 GRIN1Q05586 938 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 SEPT12Q8IYM1 358 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 TMTC2Q8N394 836 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 CRACR2BQ8N4Y2 399 aaPredicted RBP17.61■□□□□ 0.41
BRCC3-201ENST00000330045 MAN1B1Q9UKM7 699 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 PNPLA7Q6ZV29 1317 aa17.61■□□□□ 0.41
BRCC3-201ENST00000330045 CCDC196A0A1B0GTZ2 297 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 POLR2DO15514 142 aaKnown RBP17.6■□□□□ 0.41
BRCC3-201ENST00000330045 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 PHLPP2Q6ZVD8 1323 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 DNAI1Q9UI46 699 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
BRCC3-201ENST00000330045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.6■□□□□ 0.41
BRCC3-201ENST00000330045 BTAF1O14981 1849 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
BRCC3-201ENST00000330045 GOLGA8FQ08AF8 430 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 GOLGA8DPQ0D2H9 430 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 ERCC6LQ2NKX8 1250 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 FCHSD1Q86WN1 690 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 MTA3Q9BTC8 594 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 INTS13Q9NVM9 706 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 SERTAD1Q9UHV2 236 aa17.6■□□□□ 0.41
BRCC3-201ENST00000330045 BCAMP50895 628 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 NR5A1Q13285 461 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
BRCC3-201ENST00000330045 ZNF579Q8NAF0 562 aaKnown RBP17.59■□□□□ 0.41
BRCC3-201ENST00000330045 MLKLQ8NB16 471 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 PCDHB6Q9Y5E3 794 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 RREB1Q92766 1687 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
BRCC3-201ENST00000330045 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 REXO1L1PQ8IX06 675 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 KRT222Q8N1A0 295 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 FANCBQ8NB91 859 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 SMARCE1Q969G3 411 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
BRCC3-201ENST00000330045 SRP68Q9UHB9 627 aaKnown RBP17.59■□□□□ 0.41
BRCC3-201ENST00000330045 DACH1Q9UI36 760 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 CEP131Q9UPN4 1083 aa17.59■□□□□ 0.41
BRCC3-201ENST00000330045 PRR29P0C7W0 189 aa17.58■□□□□ 0.41
BRCC3-201ENST00000330045 HSP90AA4PQ58FG1 418 aa17.58■□□□□ 0.41
BRCC3-201ENST00000330045 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.41
BRCC3-201ENST00000330045 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.41
BRCC3-201ENST00000330045 NUP133Q8WUM0 1156 aa17.58■□□□□ 0.41
BRCC3-201ENST00000330045 SRPRBQ9Y5M8 271 aaKnown RBP17.58■□□□□ 0.41
BRCC3-201ENST00000330045 ARHGAP6O43182 974 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 ZSCAN12O43309 604 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 KIF20AO95235 890 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.4
BRCC3-201ENST00000330045 RCAN1P53805 252 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 GABPB1Q06547 395 aaPredicted RBP17.58■□□□□ 0.4
BRCC3-201ENST00000330045 TMEM139Q8IV31 216 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 ZNF654Q8IZM8 581 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 ENOX1Q8TC92 643 aaKnown RBP17.58■□□□□ 0.4
BRCC3-201ENST00000330045 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
BRCC3-201ENST00000330045 LRP2BPQ9P2M1 347 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 NFE2L3Q9Y4A8 694 aa17.58■□□□□ 0.4
BRCC3-201ENST00000330045 FMR1Q06787 632 aaKnown RBP eCLIP17.57■□□□□ 0.4
BRCC3-201ENST00000330045 TBX2Q13207 712 aaPredicted RBP17.57■□□□□ 0.4
BRCC3-201ENST00000330045 MORC3Q14149 939 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 KANK3Q6NY19 840 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 FAM53CQ9NYF3 392 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 COL4A1P02462 1669 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 IGSF3O75054 1194 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 H2AFXP16104 143 aaPredicted RBP17.57■□□□□ 0.4
BRCC3-201ENST00000330045 ZNF18P17022 549 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 ATP2B1P20020 1258 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 PPARAQ07869 468 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 TRIML1Q8N9V2 468 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 NOL10Q9BSC4 688 aaKnown RBP17.57■□□□□ 0.4
BRCC3-201ENST00000330045 UBAC1Q9BSL1 405 aa17.57■□□□□ 0.4
BRCC3-201ENST00000330045 NTSR2O95665 410 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
BRCC3-201ENST00000330045 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 GRAMD1CQ8IYS0 662 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 CCDC24Q8N4L8 307 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 PDILTQ8N807 584 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 CCNL1Q9UK58 526 aaPredicted RBP17.56■□□□□ 0.4
BRCC3-201ENST00000330045 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
BRCC3-201ENST00000330045 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 BAG1Q99933 345 aaPredicted RBP17.56■□□□□ 0.4
BRCC3-201ENST00000330045 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
BRCC3-201ENST00000330045 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
BRCC3-201ENST00000330045 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
BRCC3-201ENST00000330045 SPECC1LQ69YQ0 1117 aa17.55■□□□□ 0.4
BRCC3-201ENST00000330045 SRRTQ9BXP5 876 aaKnown RBP17.55■□□□□ 0.4
BRCC3-201ENST00000330045 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
BRCC3-201ENST00000330045 ZNF446Q9NWS9 450 aa17.55■□□□□ 0.4
BRCC3-201ENST00000330045 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
BRCC3-201ENST00000330045 GNPATO15228 680 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms