RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PRC1O43663 620 aa22.04■■□□□ 1.12
EXOSC3-201ENST00000327304 RANBP6O60518 1105 aaKnown RBP22.04■■□□□ 1.12
EXOSC3-201ENST00000327304 MCM5P33992 734 aa22.04■■□□□ 1.12
EXOSC3-201ENST00000327304 TEPSINQ96N21 525 aa22.04■■□□□ 1.12
EXOSC3-201ENST00000327304 TPCN1Q9ULQ1 816 aa22.04■■□□□ 1.12
EXOSC3-201ENST00000327304 LARGE1O95461 756 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 RASA1P20936 1047 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 SHMT1P34896 483 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 FAM47AQ5JRC9 791 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 CRACR2BQ8N4Y2 399 aaPredicted RBP22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 ESR2Q92731 530 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 PITPNM2Q9BZ72 1349 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 ME3Q16798 604 aa22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 EAPPQ56P03 285 aaPredicted RBP22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 METTL16Q86W50 562 aaKnown RBP22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 LARP6Q9BRS8 491 aaKnown RBP22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 GPHNQ9NQX3 736 aaPredicted RBP22.03■■□□□ 1.12
EXOSC3-201ENST00000327304 POLR2AP24928 1970 aaKnown RBP22.02■■□□□ 1.12
EXOSC3-201ENST00000327304 PKP1Q13835 747 aa22.02■■□□□ 1.12
EXOSC3-201ENST00000327304 FOXP4Q8IVH2 680 aaPredicted RBP22.02■■□□□ 1.12
EXOSC3-201ENST00000327304 SWAP70Q9UH65 585 aa22.02■■□□□ 1.12
EXOSC3-201ENST00000327304 ZDHHC9Q9Y397 364 aa22.02■■□□□ 1.12
EXOSC3-201ENST00000327304 BRD1O95696 1058 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 Q6ZUG5 572 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 RRAGCQ9HB90 399 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 ZNF287Q9HBT7 754 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 WDR19Q8NEZ3 1342 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 FBXL16Q8N461 479 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 ZKSCAN3Q9BRR0 538 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 TRIM34Q9BYJ4 488 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 AGXT2Q9BYV1 514 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 SMC3Q9UQE7 1217 aa22.01■■□□□ 1.11
EXOSC3-201ENST00000327304 MYH8P13535 1937 aa22■■□□□ 1.11
EXOSC3-201ENST00000327304 BAG4O95429 457 aaKnown RBP22■■□□□ 1.11
EXOSC3-201ENST00000327304 TFAP4Q01664 338 aa22■■□□□ 1.11
EXOSC3-201ENST00000327304 PRAMEF18Q5VWM3 479 aa22■■□□□ 1.11
EXOSC3-201ENST00000327304 CCDC83Q8IWF9 413 aa22■■□□□ 1.11
EXOSC3-201ENST00000327304 ZNF444Q8N0Y2 327 aaPredicted RBP22■■□□□ 1.11
EXOSC3-201ENST00000327304 ZNF526Q8TF50 670 aaPredicted RBP22■■□□□ 1.11
EXOSC3-201ENST00000327304 DCPSQ96C86 337 aaKnown RBP22■■□□□ 1.11
EXOSC3-201ENST00000327304 TSPY2A6NKD2 308 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 GOLGA6L22H0YM25 854 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 NBPF12Q5TAG4 269 aaPredicted RBP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 PNMA8AQ86V59 439 aaPredicted RBP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 ZC3H15Q8WU90 426 aaKnown RBP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 ADM5C9JUS6 153 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 POTEIP0CG38 1075 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 POTEJP0CG39 1038 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 PDIA4P13667 645 aaKnown RBP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 FGD1P98174 961 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 DLK2Q6UY11 383 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 MIGA2Q7L4E1 593 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 NMRK2Q9NPI5 230 aa21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 HERC5Q9UII4 1024 aaKnown RBP21.99■■□□□ 1.11
EXOSC3-201ENST00000327304 SH2B2O14492 632 aaPredicted RBP21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 NMT2O60551 498 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 AKR1B1P15121 316 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 ST3GAL1Q11201 340 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 TATDN1Q6P1N9 297 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 IGDCC4Q8TDY8 1250 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 BRF1Q92994 677 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 TAOK2Q9UL54 1235 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 PPP2R3BQ9Y5P8 575 aa21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 WDR33Q9C0J8 1336 aaKnown RBP21.98■■□□□ 1.11
EXOSC3-201ENST00000327304 IFIT3O14879 490 aaKnown RBP21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 TSPY3P0CV98 308 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 TSPY8P0CW00 308 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 TMEM67Q5HYA8 995 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 KRT26Q7Z3Y9 468 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 SULF1Q8IWU6 871 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 TMEM87BQ96K49 555 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 UBAC1Q9BSL1 405 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 SENP2Q9HC62 589 aa21.97■■□□□ 1.11
EXOSC3-201ENST00000327304 TBC1D12O60347 775 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 MAP3K10Q02779 954 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 RRP1BQ14684 758 aaKnown RBP21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 SHROOM1Q2M3G4 852 aaPredicted RBP21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 ZSCAN10Q96SZ4 725 aaPredicted RBP21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 TNKSO95271 1327 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 NT5C2P49902 561 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 CERKLQ49MI3 558 aaPredicted RBP21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 IQCA1Q86XH1 822 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 NEDD1Q8NHV4 660 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 LY9Q9HBG7 655 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 IL17RBQ9NRM6 502 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 ANGEL1Q9UNK9 670 aaKnown RBP21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 SSC5DA1L4H1 1573 aa21.96■■□□□ 1.11
EXOSC3-201ENST00000327304 GJB2P29033 226 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 APOBRQ0VD83 1088 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 SART3Q15020 963 aaKnown RBP21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 SEC23AQ15436 765 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 USP48Q86UV5 1035 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 ENAHQ8N8S7 591 aaPredicted RBP21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 NECAB1Q8N987 351 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 CLEC11AQ9Y240 323 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 PLIN4Q96Q06 1357 aa21.95■■□□□ 1.1
EXOSC3-201ENST00000327304 GDF11O95390 407 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms