RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 CCDC102AQ96A19 550 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 INTS4Q96HW7 963 aaKnown RBP21.23■□□□□ 0.99
SYNE4-201ENST00000324444 TMX3Q96JJ7 454 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 DHX36Q9H2U1 1008 aaKnown RBP21.23■□□□□ 0.99
SYNE4-201ENST00000324444 TOMM22Q9NS69 142 aa21.23■□□□□ 0.99
SYNE4-201ENST00000324444 ERICH2A1L162 156 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 ORC4O43929 436 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 CD2BP2O95400 341 aaKnown RBP21.22■□□□□ 0.99
SYNE4-201ENST00000324444 FKBP1BP68106 108 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 CTDSPL2Q05D32 466 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 CCDC178Q5BJE1 867 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 Q6ZUG5 572 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 TMTC2Q8N394 836 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 AGXT2Q9BYV1 514 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 NBPF3Q9H094 633 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 CWC22Q9HCG8 908 aaKnown RBP21.22■□□□□ 0.99
SYNE4-201ENST00000324444 TSKSQ9UJT2 592 aa21.22■□□□□ 0.99
SYNE4-201ENST00000324444 ROBO3Q96MS0 1386 aa21.21■□□□□ 0.99
SYNE4-201ENST00000324444 PAPPA2Q9BXP8 1791 aa21.21■□□□□ 0.99
SYNE4-201ENST00000324444 PRC1O43663 620 aa21.21■□□□□ 0.99
SYNE4-201ENST00000324444 HLA-DOAP06340 250 aa21.21■□□□□ 0.99
SYNE4-201ENST00000324444 SPDYE2Q495Y8 402 aa21.21■□□□□ 0.99
SYNE4-201ENST00000324444 MOB2Q70IA6 237 aa21.21■□□□□ 0.99
SYNE4-201ENST00000324444 TDRD3Q9H7E2 651 aaKnown RBP21.21■□□□□ 0.99
SYNE4-201ENST00000324444 ENTPD3O75355 529 aa21.2■□□□□ 0.98
SYNE4-201ENST00000324444 CPA1P15085 419 aa21.2■□□□□ 0.98
SYNE4-201ENST00000324444 FKBP1CQ5VVH2 108 aa21.2■□□□□ 0.98
SYNE4-201ENST00000324444 IQCA1Q86XH1 822 aa21.2■□□□□ 0.98
SYNE4-201ENST00000324444 DDX4Q9NQI0 724 aaKnown RBP21.2■□□□□ 0.98
SYNE4-201ENST00000324444 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.2■□□□□ 0.98
SYNE4-201ENST00000324444 COL2A1P02458 1487 aaPredicted RBP21.19■□□□□ 0.98
SYNE4-201ENST00000324444 SIPA1L1O43166 1804 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 B4E1Z4 1266 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 CAPN15O75808 1086 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 SLC10A3P09131 477 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 NF2P35240 595 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 SLC4A3P48751 1232 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 NFIAQ12857 509 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 CUL4AQ13619 759 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 TTLL12Q14166 644 aaPredicted RBP21.19■□□□□ 0.98
SYNE4-201ENST00000324444 OSBPL5Q9H0X9 879 aaPredicted RBP21.19■□□□□ 0.98
SYNE4-201ENST00000324444 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 SWAP70Q9UH65 585 aa21.19■□□□□ 0.98
SYNE4-201ENST00000324444 CA12O43570 354 aa21.18■□□□□ 0.98
SYNE4-201ENST00000324444 KIF23Q02241 960 aaPredicted RBP21.18■□□□□ 0.98
SYNE4-201ENST00000324444 RRP12Q5JTH9 1297 aaKnown RBP21.18■□□□□ 0.98
SYNE4-201ENST00000324444 ZNF274Q96GC6 653 aaPredicted RBP21.18■□□□□ 0.98
SYNE4-201ENST00000324444 UBAC1Q9BSL1 405 aa21.18■□□□□ 0.98
SYNE4-201ENST00000324444 ZSWIM5Q9P217 1185 aa21.18■□□□□ 0.98
SYNE4-201ENST00000324444 ZNF70Q9UC06 446 aaPredicted RBP21.18■□□□□ 0.98
SYNE4-201ENST00000324444 FAM198AQ9UFP1 575 aa21.18■□□□□ 0.98
SYNE4-201ENST00000324444 ANGEL1Q9UNK9 670 aaKnown RBP21.18■□□□□ 0.98
SYNE4-201ENST00000324444 NEDD4P46934 1319 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 CLRN2A0PK11 232 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 UBE2Q2LH0YL09 131 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 KDM4AO75164 1064 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 LIFRP42702 1097 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 EVCP57679 992 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 PICALMQ13492 652 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 TOB2Q14106 344 aaPredicted RBP21.17■□□□□ 0.98
SYNE4-201ENST00000324444 RASAL3Q86YV0 1011 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 ZNF444Q8N0Y2 327 aaPredicted RBP21.17■□□□□ 0.98
SYNE4-201ENST00000324444 BRF1Q92994 677 aa21.17■□□□□ 0.98
SYNE4-201ENST00000324444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.17■□□□□ 0.98
SYNE4-201ENST00000324444 PDIA4P13667 645 aaKnown RBP21.16■□□□□ 0.98
SYNE4-201ENST00000324444 CACNB3P54284 484 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 SYNE3Q6ZMZ3 975 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 C16orf86Q6ZW13 317 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 DEFB129Q9H1M3 183 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 EHD4Q9H223 541 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 VEZTQ9HBM0 779 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 SAP30BPQ9UHR5 308 aaKnown RBP21.16■□□□□ 0.98
SYNE4-201ENST00000324444 CIZ1Q9ULV3 898 aaPredicted RBP21.16■□□□□ 0.98
SYNE4-201ENST00000324444 PPP2R3BQ9Y5P8 575 aa21.16■□□□□ 0.98
SYNE4-201ENST00000324444 ATRNL1Q5VV63 1379 aa21.15■□□□□ 0.98
SYNE4-201ENST00000324444 IFIT3O14879 490 aaKnown RBP21.15■□□□□ 0.98
SYNE4-201ENST00000324444 DHX16O60231 1041 aaKnown RBP21.15■□□□□ 0.98
SYNE4-201ENST00000324444 RANBP6O60518 1105 aaKnown RBP21.15■□□□□ 0.98
SYNE4-201ENST00000324444 TNNI2P48788 182 aa21.15■□□□□ 0.98
SYNE4-201ENST00000324444 TMEM67Q5HYA8 995 aa21.15■□□□□ 0.98
SYNE4-201ENST00000324444 NOL8Q76FK4 1167 aaKnown RBP21.15■□□□□ 0.98
SYNE4-201ENST00000324444 CYP2D7A0A087X1C5 515 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 TNFAIP1Q13829 316 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 PRKG1Q13976 671 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 PPP4R3BQ5MIZ7 849 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 FOXP4Q8IVH2 680 aaPredicted RBP21.14■□□□□ 0.98
SYNE4-201ENST00000324444 TCEANC2Q96MN5 208 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 SLKQ9H2G2 1235 aaPredicted RBP21.14■□□□□ 0.98
SYNE4-201ENST00000324444 PI4KBQ9UBF8 816 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 SERPINB13Q9UIV8 391 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 TPCN1Q9ULQ1 816 aa21.14■□□□□ 0.98
SYNE4-201ENST00000324444 TSPY2A6NKD2 308 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 SH2B2O14492 632 aaPredicted RBP21.13■□□□□ 0.97
SYNE4-201ENST00000324444 CYP2D6P10635 497 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 RCAN1P53805 252 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 ANTXR2P58335 489 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 WTAPQ15007 396 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 CYB5R4Q7L1T6 521 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 FAM83AQ86UY5 434 aa21.13■□□□□ 0.97
SYNE4-201ENST00000324444 SGMS1Q86VZ5 419 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms