RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 HIP1RO75146 1068 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 TRPA1O75762 1119 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 GNAQP50148 359 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 TRPC3Q13507 836 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 KCNV2Q8TDN2 545 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 PCF11O94913 1555 aaKnown RBP8.76□□□□□ -1.01
CIITA-201ENST00000324288 GRIN2BQ13224 1484 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 KRT15P19012 456 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
CIITA-201ENST00000324288 ADGRF5Q8IZF2 1346 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 TUBBP07437 444 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 KRT19P08727 400 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 RLBP1P12271 317 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 PDE6BP35913 854 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 HDAC1Q13547 482 aaPredicted RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 RNF113AO15541 343 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 DMTNQ08495 405 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 RSPH3Q86UC2 560 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 LDHBP07195 334 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 CALML3P27482 149 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 SERPINB6P35237 376 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 RCN2Q14257 317 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 PIK3AP1Q6ZUJ8 805 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 NOS1P29475 1434 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 CSPG5O95196 566 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 NCAPH2Q6IBW4 605 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 RUFY4Q6ZNE9 571 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 MBD4O95243 580 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 NLRP12P59046 1061 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 TYW1BQ6NUM6 668 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 CTAGE3PQ8IX95 158 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 ZBBXA8MT70 800 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 COBLO75128 1261 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 MAGEA1P43355 309 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 PIP4K2CQ8TBX8 421 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 SBNO1A3KN83 1393 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 UBL4BQ8N7F7 174 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 SPDL1Q96EA4 605 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 VCX3AQ9NNX9 186 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 NFE2L3Q9Y4A8 694 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 KIF14Q15058 1648 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 NOP9Q86U38 636 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 DCLK2Q8N568 766 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 LRRC59Q96AG4 307 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 RRP15Q9Y3B9 282 aaKnown RBP8.75□□□□□ -1.01
CIITA-201ENST00000324288 TTC21BQ7Z4L5 1316 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 C8orf58Q8NAV2 365 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 PIK3R5Q8WYR1 880 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 STAMQ92783 540 aa8.75□□□□□ -1.01
CIITA-201ENST00000324288 MAP1BP46821 2468 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 EIF4E1BA6NMX2 242 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 PEX26Q7Z412 305 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 PDZD8Q8NEN9 1154 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 B4E1Z4 1266 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 STK10O94804 968 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 TUBB4BP68371 445 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 PAK2Q13177 524 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 SV2BQ7L1I2 683 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 GOLGA5Q8TBA6 731 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 CHAMP1Q96JM3 812 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 ANLNQ9NQW6 1124 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 SEPT10Q9P0V9 454 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 NOP56O00567 594 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 POLE2P56282 527 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 NLRP3Q96P20 1036 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 PLCB1Q9NQ66 1216 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 HELLSQ9NRZ9 838 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.74□□□□□ -1.01
CIITA-201ENST00000324288 NDUFB9Q9Y6M9 179 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 PTPN21Q16825 1174 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 MRPL50Q8N5N7 158 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 KIFAP3Q92845 792 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 BLZF1Q9H2G9 400 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 XPO4Q9C0E2 1151 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 DPH5Q9H2P9 285 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 DDX41Q9UJV9 622 aaKnown RBP8.74□□□□□ -1.01
CIITA-201ENST00000324288 PYCARDQ9ULZ3 195 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 JAK2O60674 1132 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 KRT24Q2M2I5 525 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 RILPL1Q5EBL4 403 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 NAA35Q5VZE5 725 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 RRAGAQ7L523 313 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 SNAPC4Q5SXM2 1469 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 RPS6KA2Q15349 733 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 RPS6KA1Q15418 735 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 EP400NLQ6ZTU2 488 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 TAOK1Q7L7X3 1001 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 CCDC105Q8IYK2 499 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 IQUBQ8NA54 791 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 CTTNBP2NLQ9P2B4 639 aa8.74□□□□□ -1.01
CIITA-201ENST00000324288 PRDM1O75626 825 aa8.73□□□□□ -1.01
CIITA-201ENST00000324288 INPP1P49441 399 aa8.73□□□□□ -1.01
CIITA-201ENST00000324288 CSGALNACT2Q8N6G5 542 aa8.73□□□□□ -1.01
CIITA-201ENST00000324288 TFCP2L1Q9NZI6 479 aa8.73□□□□□ -1.01
CIITA-201ENST00000324288 GIPC1O14908 333 aa8.73□□□□□ -1.01
CIITA-201ENST00000324288 SAT1P21673 171 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms