RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 POLA2Q14181 598 aa15.02■□□□□ -0
NBPF3-201ENST00000318220 TBC1D16Q8TBP0 767 aa15.02■□□□□ -0
NBPF3-201ENST00000318220 DHX36Q9H2U1 1008 aaKnown RBP15.02■□□□□ -0
NBPF3-201ENST00000318220 MKRN1Q9UHC7 482 aaKnown RBP15.02■□□□□ -0
NBPF3-201ENST00000318220 CCT6AP40227 531 aaKnown RBP15.02□□□□□ -0.01
NBPF3-201ENST00000318220 VPS54Q9P1Q0 977 aa15.02□□□□□ -0.01
NBPF3-201ENST00000318220 LRSAM1Q6UWE0 723 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 ARHGEF35A5YM69 484 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 MAP3K11Q16584 847 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 MYO3BQ8WXR4 1341 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 CAMTA2O94983 1202 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 REXO1Q8N1G1 1221 aaKnown RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 CCDC97Q96F63 343 aaPredicted RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 ZFP91Q96JP5 570 aaPredicted RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 KCNJ14Q9UNX9 436 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 USP42Q9H9J4 1324 aaKnown RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 SLC27A2O14975 620 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 KRT13P13646 458 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 PDIA4P13667 645 aaKnown RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 APOBEC3FQ8IUX4 373 aaKnown RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 ZNF654Q8IZM8 581 aa15.01□□□□□ -0.01
NBPF3-201ENST00000318220 MRPL11Q9Y3B7 192 aaKnown RBP15.01□□□□□ -0.01
NBPF3-201ENST00000318220 TULP4Q9NRJ4 1543 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 SMCO2A6NFE2 343 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 SYKP43405 635 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 BIRC3Q13489 604 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 LCORLQ8N3X6 602 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 TSPY26PQ9H489 355 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 ATP6V0A2Q9Y487 856 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 UBE2Q2LH0YL09 131 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 PSTPIP2Q9H939 334 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 SNAP25P60880 206 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 RAD50Q92878 1312 aa15□□□□□ -0.01
NBPF3-201ENST00000318220 PSMD14O00487 310 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 GAS7O60861 476 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 DIS3L2Q8IYB7 885 aaKnown RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 ZBED2Q9BTP6 218 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 HSPD1P10809 573 aaKnown RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 BMP3P12645 472 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 FOXP4Q8IVH2 680 aaPredicted RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 ABCC4O15439 1325 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 GCOM1H8Y6P7 765 aaPredicted RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 POLR2MP0CAP2 368 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 PRR16Q569H4 304 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 CDC37L1Q7L3B6 337 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 PNMA8AQ86V59 439 aaPredicted RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 TPH2Q8IWU9 490 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 IFT74Q96LB3 600 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 FGFR1OPO95684 399 aaKnown RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 TOP1P11387 765 aaKnown RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 GOLGA6L1Q8N7Z2 621 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 SLC44A5Q8NCS7 719 aa14.99□□□□□ -0.01
NBPF3-201ENST00000318220 GPKOWQ92917 476 aaPredicted RBP eCLIP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 PRDM5Q9NQX1 630 aaPredicted RBP14.99□□□□□ -0.01
NBPF3-201ENST00000318220 CLTCL1P53675 1640 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 ZBBXA8MT70 800 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 SGSM2O43147 1006 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 NONOQ15233 471 aaKnown RBP eCLIP14.98□□□□□ -0.01
NBPF3-201ENST00000318220 HAUS7Q99871 368 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 BMP15O95972 392 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 HOXD10P28358 340 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 ADD1P35611 737 aaKnown RBP14.98□□□□□ -0.01
NBPF3-201ENST00000318220 CCDC84Q86UT8 332 aaPredicted RBP14.98□□□□□ -0.01
NBPF3-201ENST00000318220 HMGCS2P54868 508 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 ANO3Q9BYT9 981 aa14.98□□□□□ -0.01
NBPF3-201ENST00000318220 E7EWF7 191 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 CIAO1O76071 339 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 DEXIO95424 95 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 USP37Q86T82 979 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
NBPF3-201ENST00000318220 PSMD1Q99460 953 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 LRRC27Q9C0I9 530 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 ERCC3P19447 782 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 SEPT2Q15019 361 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 UBE3CQ15386 1083 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 USP17L2Q6R6M4 530 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 RUFY3Q7L099 469 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 ABI1Q8IZP0 508 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 SPAG5Q96R06 1193 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 UBN2Q6ZU65 1347 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 LETM1O95202 739 aaPredicted RBP14.97□□□□□ -0.01
NBPF3-201ENST00000318220 NASPP49321 788 aaPredicted RBP14.97□□□□□ -0.01
NBPF3-201ENST00000318220 NFX1Q12986 1120 aaKnown RBP14.97□□□□□ -0.01
NBPF3-201ENST00000318220 ZSCAN10Q96SZ4 725 aaPredicted RBP14.97□□□□□ -0.01
NBPF3-201ENST00000318220 ISCA1Q9BUE6 129 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 TBC1D2Q9BYX2 928 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 ADD3Q9UEY8 706 aaKnown RBP14.97□□□□□ -0.01
NBPF3-201ENST00000318220 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 USP31Q70CQ4 1352 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 TTLL1O95922 423 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 SLFNL1Q499Z3 407 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 MAP7D2Q96T17 732 aa14.97□□□□□ -0.01
NBPF3-201ENST00000318220 PPP1R16BQ96T49 567 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms