RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 BCORQ6W2J9 1755 aa21.8■■□□□ 1.08
RTN4-201ENST00000317610 AKR1B15C9JRZ8 316 aaPredicted RBP21.79■■□□□ 1.08
RTN4-201ENST00000317610 CCDC175P0C221 793 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 GRAMD1CQ8IYS0 662 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 CRACR2BQ8N4Y2 399 aaPredicted RBP21.79■■□□□ 1.08
RTN4-201ENST00000317610 NAA15Q9BXJ9 866 aaKnown RBP21.79■■□□□ 1.08
RTN4-201ENST00000317610 ARFGAP3Q9NP61 516 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 MBD4O95243 580 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 DESI2Q9BSY9 194 aa21.79■■□□□ 1.08
RTN4-201ENST00000317610 GSG1L2A8MUP6 293 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 PBX1P40424 430 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 PUM3Q15397 648 aaKnown RBP21.78■■□□□ 1.08
RTN4-201ENST00000317610 HLFQ16534 295 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 MFSD6Q6ZSS7 791 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 LPIN2Q92539 896 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 CARD10Q9BWT7 1032 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.78■■□□□ 1.08
RTN4-201ENST00000317610 TXLNAP40222 546 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 FUT8Q9BYC5 575 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 CSRNP2Q9H175 543 aa21.78■■□□□ 1.08
RTN4-201ENST00000317610 CCDC196A0A1B0GTZ2 297 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 OAS2P29728 719 aaKnown RBP21.77■■□□□ 1.08
RTN4-201ENST00000317610 NR5A1Q13285 461 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 SMC1AQ14683 1233 aaKnown RBP21.77■■□□□ 1.08
RTN4-201ENST00000317610 WTAPQ15007 396 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 SPATA1Q5VX52 437 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 CADPS2Q86UW7 1296 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 SPATA5Q8NB90 893 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 STRN4Q9NRL3 753 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 AATFQ9NY61 560 aaKnown RBP eCLIP21.77■■□□□ 1.08
RTN4-201ENST00000317610 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 ADGRG1Q9Y653 693 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 MYH6P13533 1939 aa21.77■■□□□ 1.08
RTN4-201ENST00000317610 CCDC151A5D8V7 595 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 IRS4O14654 1257 aaPredicted RBP21.77■■□□□ 1.07
RTN4-201ENST00000317610 POLR3GO15318 223 aaPredicted RBP21.77■■□□□ 1.07
RTN4-201ENST00000317610 MAP3K12Q12852 859 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 MTF1Q14872 753 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 SART3Q15020 963 aaKnown RBP21.77■■□□□ 1.07
RTN4-201ENST00000317610 KARSQ15046 597 aaKnown RBP21.77■■□□□ 1.07
RTN4-201ENST00000317610 SH3RF1Q7Z6J0 888 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 TMTC2Q8N394 836 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 MAGEB6Q8N7X4 407 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 CCDC12Q8WUD4 166 aaPredicted RBP21.77■■□□□ 1.07
RTN4-201ENST00000317610 PRDM11Q9NQV5 511 aa21.77■■□□□ 1.07
RTN4-201ENST00000317610 GPTP24298 496 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 CUL4BQ13620 913 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 BRD3Q15059 726 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 USP49Q70CQ1 688 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 ARMT1Q9H993 441 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 MROH5Q6ZUA9 1318 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 PNPLA7Q6ZV29 1317 aa21.76■■□□□ 1.07
RTN4-201ENST00000317610 SOWAHDA6NJG2 315 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 SEMA3EO15041 775 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 TEX33O43247 280 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 STARD3NLO95772 234 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 CDKAL1Q5VV42 579 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 RAD9BQ6WBX8 426 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 PDE8AO60658 829 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 GNAT2P19087 354 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 FECHP22830 423 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 HNRNPH2P55795 449 aaKnown RBP21.75■■□□□ 1.07
RTN4-201ENST00000317610 SRGAP1Q7Z6B7 1085 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 TXLNBQ8N3L3 684 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 OXER1Q8TDS5 423 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 CCDC34Q96HJ3 373 aa21.75■■□□□ 1.07
RTN4-201ENST00000317610 ADD3Q9UEY8 706 aaKnown RBP21.75■■□□□ 1.07
RTN4-201ENST00000317610 BCL9LQ86UU0 1499 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 TULP2O00295 520 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 TUBB2AQ13885 445 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 TUBB2BQ9BVA1 445 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 RBL2Q08999 1139 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 RASGRP2Q7LDG7 609 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 IGSF22Q8N9C0 903 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 FANCBQ8NB91 859 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 SYNRGQ9UMZ2 1314 aa21.74■■□□□ 1.07
RTN4-201ENST00000317610 NUP98P52948 1817 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 MAP2K7O14733 419 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 RASGRF1Q13972 1273 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 PPFIBP1Q86W92 1011 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 HNRNPLLQ8WVV9 542 aaKnown RBP21.73■■□□□ 1.07
RTN4-201ENST00000317610 CTAGE1Q96RT6 745 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 IRX2Q9BZI1 471 aaPredicted RBP21.73■■□□□ 1.07
RTN4-201ENST00000317610 CABP5Q9NP86 173 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 PLCH1Q4KWH8 1693 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 A0A087X0B3 334 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 CD44P16070 742 aaKnown RBP21.73■■□□□ 1.07
RTN4-201ENST00000317610 CHMP4BP1P59074 171 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 LONRF2Q1L5Z9 754 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 ZNF654Q8IZM8 581 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 ZKSCAN3Q9BRR0 538 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 RNF26Q9BY78 433 aaPredicted RBP21.73■■□□□ 1.07
RTN4-201ENST00000317610 NACAP1Q9BZK3 213 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 CDC23Q9UJX2 597 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 ASAP1Q9ULH1 1129 aa21.73■■□□□ 1.07
RTN4-201ENST00000317610 ERICH2A1L162 156 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 PRKAB2O43741 272 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 MFAP3LO75121 409 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms