RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 MMP1P03956 469 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
CHFR-202ENST00000315585 AKAP17AQ02040 695 aaKnown RBP17.15■□□□□ 0.34
CHFR-202ENST00000315585 DPCR1Q3MIW9 517 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 C15orf52Q6ZUT6 534 aaKnown RBP17.15■□□□□ 0.34
CHFR-202ENST00000315585 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
CHFR-202ENST00000315585 WDHD1O75717 1129 aaPredicted RBP17.15■□□□□ 0.34
CHFR-202ENST00000315585 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
CHFR-202ENST00000315585 CCDC144BQ3MJ40 725 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 FILIP1Q7Z7B0 1213 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 CCDC144CPQ8IYA2 1237 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 CRAMP1Q96RY5 1269 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
CHFR-202ENST00000315585 MYH13Q9UKX3 1938 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 RXRAP19793 462 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 PPARAQ07869 468 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
CHFR-202ENST00000315585 KANK3Q6NY19 840 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 AKT1S1Q96B36 256 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
CHFR-202ENST00000315585 CCP110O43303 1012 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 KCNJ6P48051 423 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 ZNF579Q8NAF0 562 aaKnown RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 COL1A1P02452 1464 aaPredicted RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 RANBP6O60518 1105 aaKnown RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 SMC2O95347 1197 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 CALM1P0DP23 149 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 CALM2P0DP24 149 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 CALM3P0DP25 149 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 MIGA1Q8NAN2 632 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 FANCBQ8NB91 859 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 KCNH3Q9ULD8 1083 aa17.13■□□□□ 0.33
CHFR-202ENST00000315585 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
CHFR-202ENST00000315585 WTIPA6NIX2 430 aaPredicted RBP17.12■□□□□ 0.33
CHFR-202ENST00000315585 NT5C2P49902 561 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 DDR1Q08345 913 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 SHC4Q6S5L8 630 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
CHFR-202ENST00000315585 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
CHFR-202ENST00000315585 CHD4Q14839 1912 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 BMP15O95972 392 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 MYL5Q02045 173 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 DIS3L2Q8IYB7 885 aaKnown RBP17.12■□□□□ 0.33
CHFR-202ENST00000315585 RBM28Q9NW13 759 aaKnown RBP17.12■□□□□ 0.33
CHFR-202ENST00000315585 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
CHFR-202ENST00000315585 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHFR-202ENST00000315585 KLRK1P26718 216 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 CEP135Q66GS9 1140 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 IQCA1Q86XH1 822 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 ZNF654Q8IZM8 581 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 SENP2Q9HC62 589 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
CHFR-202ENST00000315585 ERCC4Q92889 916 aaPredicted RBP17.11■□□□□ 0.33
CHFR-202ENST00000315585 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
CHFR-202ENST00000315585 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
CHFR-202ENST00000315585 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
CHFR-202ENST00000315585 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 FBXW7Q969H0 707 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
CHFR-202ENST00000315585 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 IFNKQ9P0W0 207 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 MAST2Q6P0Q8 1798 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 BIN1O00499 593 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 PRKAB2O43741 272 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 CATIPQ7Z7H3 387 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
CHFR-202ENST00000315585 TRIML1Q8N9V2 468 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 XPO4Q9C0E2 1151 aaKnown RBP17.1■□□□□ 0.33
CHFR-202ENST00000315585 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
CHFR-202ENST00000315585 PTPREP23469 700 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 GSTO1P78417 241 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 MECOMQ03112 1051 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 CT47A1Q5JQC4 288 aaPredicted RBP17.09■□□□□ 0.33
CHFR-202ENST00000315585 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 BTBD18B2RXH4 712 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 GPSM2P81274 684 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 CCZ1BP86790 482 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 CCZ1P86791 482 aaPredicted RBP17.09■□□□□ 0.33
CHFR-202ENST00000315585 NBPF11Q86T75 865 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms