RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.04
SKA3-202ENST00000314759 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
SKA3-202ENST00000314759 ATRIPQ8WXE1 791 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 WASF1Q92558 559 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 FOXP1Q9H334 677 aaPredicted RBP15.33■□□□□ 0.04
SKA3-202ENST00000314759 LZTFL1Q9NQ48 299 aa15.33■□□□□ 0.04
SKA3-202ENST00000314759 MYO5AQ9Y4I1 1855 aaKnown RBP15.32■□□□□ 0.04
SKA3-202ENST00000314759 AKR1B15C9JRZ8 316 aaPredicted RBP15.32■□□□□ 0.04
SKA3-202ENST00000314759 PLCD1P51178 756 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 ALX1Q15699 326 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 PANX2Q96RD6 677 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 RASSF4Q9H2L5 321 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 SRPRBQ9Y5M8 271 aaKnown RBP15.32■□□□□ 0.04
SKA3-202ENST00000314759 LONRF2Q1L5Z9 754 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 RAD9BQ6WBX8 426 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 IFNL3Q8IZI9 196 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 CMTR1Q8N1G2 835 aaKnown RBP15.32■□□□□ 0.04
SKA3-202ENST00000314759 CNNM1Q9NRU3 951 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 TBC1D2BQ9UPU7 963 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
SKA3-202ENST00000314759 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
SKA3-202ENST00000314759 ATP2B1P20020 1258 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 ERCC5P28715 1186 aaPredicted RBP15.31■□□□□ 0.04
SKA3-202ENST00000314759 RBL2Q08999 1139 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 CSRNP2Q9H175 543 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 CCDC151A5D8V7 595 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 OXER1Q8TDS5 423 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 NAPBQ9H115 298 aa15.31■□□□□ 0.04
SKA3-202ENST00000314759 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
SKA3-202ENST00000314759 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 KANK3Q6NY19 840 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 TRIM22Q8IYM9 498 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 CPLX3Q8WVH0 158 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 PDE8BO95263 885 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 NKX1-1Q15270 411 aaPredicted RBP15.3■□□□□ 0.04
SKA3-202ENST00000314759 RTN1Q16799 776 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 JAKMIP3Q5VZ66 844 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 MAP2K7O14733 419 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
SKA3-202ENST00000314759 GPTP24298 496 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 ARID4AP29374 1257 aaPredicted RBP15.3■□□□□ 0.04
SKA3-202ENST00000314759 AKNAD1Q5T1N1 836 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 CRACR2BQ8N4Y2 399 aaPredicted RBP15.3■□□□□ 0.04
SKA3-202ENST00000314759 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 GOLGA5Q8TBA6 731 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 EXOC4Q96A65 974 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
SKA3-202ENST00000314759 LRP6O75581 1613 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 TNS2Q63HR2 1409 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 A0A087X0B3 334 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 ANKRD18BA2A2Z9 1011 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 MBD4O95243 580 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 ATF3P18847 181 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 PBX1P40424 430 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 BRD3Q15059 726 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 RRP12Q5JTH9 1297 aaKnown RBP15.29■□□□□ 0.04
SKA3-202ENST00000314759 FOXR1Q6PIV2 292 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 ANKZF1Q9H8Y5 726 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 PUF60Q9UHX1 559 aaKnown RBP15.29■□□□□ 0.04
SKA3-202ENST00000314759 NID2Q14112 1375 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 N4BP1O75113 896 aaKnown RBP15.29■□□□□ 0.04
SKA3-202ENST00000314759 CTSWP56202 376 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 STX17P56962 302 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 MCM6Q14566 821 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 HLFQ16534 295 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 SPATA1Q5VX52 437 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 KLHL10Q6JEL2 608 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 SRLQ86TD4 932 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 AK7Q96M32 723 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 CNNM2Q9H8M5 875 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 ARMT1Q9H993 441 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 SUGCTQ9HAC7 445 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 STRN4Q9NRL3 753 aa15.29■□□□□ 0.04
SKA3-202ENST00000314759 ADD3Q9UEY8 706 aaKnown RBP15.29■□□□□ 0.04
SKA3-202ENST00000314759 DEXIO95424 95 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 CASP1P29466 404 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 TOM1L2Q6ZVM7 507 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 PPFIBP1Q86W92 1011 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 MAGEB6Q8N7X4 407 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 NAA15Q9BXJ9 866 aaKnown RBP15.28■□□□□ 0.04
SKA3-202ENST00000314759 KRT23Q9C075 422 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 VPS18Q9P253 973 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
SKA3-202ENST00000314759 CDHR2Q9BYE9 1310 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 AFMP43652 599 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 CUL4BQ13620 913 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 WWC2Q6AWC2 1192 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 EPSTI1Q96J88 318 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
SKA3-202ENST00000314759 PRKAB2O43741 272 aa15.27■□□□□ 0.04
SKA3-202ENST00000314759 KIF5CO60282 957 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms