RNA–Protein interactions for RNA: ENST00000313559.9

HMGN2P46-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,039 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-201ENST00000313559 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 KIAA0825Q8IV33 1275 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 DDX54Q8TDD1 881 aaKnown RBP8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 CORO1BQ9BR76 489 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 CACNA2D2Q9NY47 1150 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 UTRNP46939 3433 aa8.43□□□□□ -1.06
HMGN2P46-201ENST00000313559 LIG1P18858 919 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 COL8A1P27658 744 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 LTKP29376 864 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 CRKP46108 304 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 GRIK4Q16099 956 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 SNAP47Q5SQN1 464 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 GPBAR1Q8TDU6 330 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 EMILIN2Q9BXX0 1053 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 UBP1Q9NZI7 540 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 INPP5FQ9Y2H2 1132 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 A2MP01023 1474 aa8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 PRDM15P57071 1507 aaPredicted RBP8.42□□□□□ -1.06
HMGN2P46-201ENST00000313559 FAM221AA4D161 298 aa8.41□□□□□ -1.06
HMGN2P46-201ENST00000313559 RAC1P63000 192 aa8.41□□□□□ -1.06
HMGN2P46-201ENST00000313559 LRRC14Q15048 493 aa8.41□□□□□ -1.06
HMGN2P46-201ENST00000313559 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
HMGN2P46-201ENST00000313559 MSH6P52701 1360 aa8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 TLR3O15455 904 aaKnown RBP8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 GJA8P48165 433 aa8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 TRIM28Q13263 835 aaKnown RBP8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 PDE3AQ14432 1141 aa8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 KIAA1211Q6ZU35 1233 aa8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 SUPT16HQ9Y5B9 1047 aaKnown RBP8.4□□□□□ -1.06
HMGN2P46-201ENST00000313559 KDM5AP29375 1690 aaKnown RBP8.4□□□□□ -1.07
HMGN2P46-201ENST00000313559 NCOA2Q15596 1464 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 TRIM37O94972 964 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 INSM1Q01101 510 aaPredicted RBP8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 DUOXA2Q1HG44 320 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 FAM196AQ6ZSG2 479 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 GATAD2BQ8WXI9 593 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 GPRASP2Q96D09 838 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 CAMTA1Q9Y6Y1 1673 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 MAST1Q9Y2H9 1570 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 ABCC3O15438 1527 aa8.39□□□□□ -1.07
HMGN2P46-201ENST00000313559 ARHGAP23Q9P227 1491 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 ATRNO75882 1429 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 KCNA6P17658 529 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 LMNB1P20700 586 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 INPP5AQ14642 412 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 ACAD11Q709F0 780 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 AGGF1Q8N302 714 aaeCLIP8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 NT5C1AQ9BXI3 368 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 PCDHA4Q9UN74 947 aa8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 INO80Q9ULG1 1556 aaPredicted RBP8.38□□□□□ -1.07
HMGN2P46-201ENST00000313559 RTEL1-TNFRSF6BF6WH68 1400 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 UBR1Q8IWV7 1749 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 IGSF3O75054 1194 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 CILPO75339 1184 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 ALX3O95076 343 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 ELNP15502 786 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 KRT82Q9NSB4 513 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 PCDHGC5Q9Y5F6 944 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 NKTRP30414 1462 aaKnown RBP8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 CEP162Q5TB80 1403 aa8.37□□□□□ -1.07
HMGN2P46-201ENST00000313559 SPAG9O60271 1321 aaKnown RBP8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 SLIT1O75093 1534 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 SPDYE3A6NKU9 549 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 AOC2O75106 756 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 DNAJA1P31689 397 aaKnown RBP8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 LRFN4Q6PJG9 635 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 IGF2-ASQ6U949 168 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 ACSBG1Q96GR2 724 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 RUSC1Q9BVN2 902 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 GINM1Q9NU53 330 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 SETD5Q9C0A6 1442 aa8.36□□□□□ -1.07
HMGN2P46-201ENST00000313559 DCDC2CA8MYV0 355 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 APOBRQ0VD83 1088 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 R3HDM1Q15032 1099 aaKnown RBP8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 SEZ6Q53EL9 994 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 PRRT3Q5FWE3 981 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 EXOSC6Q5RKV6 272 aaKnown RBP8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 PLPPR2Q96GM1 343 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 NOP53Q9NZM5 478 aaKnown RBP8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 TRPC5Q9UL62 973 aaPredicted RBP8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 PPP1R9AQ9ULJ8 1098 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 POLR3KQ9Y2Y1 108 aaPredicted RBP8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 CSADQ9Y600 493 aa8.35□□□□□ -1.07
HMGN2P46-201ENST00000313559 GFRA2O00451 464 aa8.34□□□□□ -1.07
HMGN2P46-201ENST00000313559 PIK3R2O00459 728 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms