RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GUCY1A2P33402 732 aa17.66■□□□□ 0.42
PPP1CA-201ENST00000312989 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
PPP1CA-201ENST00000312989 PARK7Q99497 189 aaKnown RBP17.66■□□□□ 0.42
PPP1CA-201ENST00000312989 TBC1D2Q9BYX2 928 aa17.66■□□□□ 0.42
PPP1CA-201ENST00000312989 CRNKL1Q9BZJ0 848 aaKnown RBP17.66■□□□□ 0.42
PPP1CA-201ENST00000312989 EFCC1Q9HA90 598 aa17.66■□□□□ 0.42
PPP1CA-201ENST00000312989 ATAD5Q96QE3 1844 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 NAV1Q8NEY1 1877 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 HMGCS2P54868 508 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 GADL1Q6ZQY3 521 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 CRACR2BQ8N4Y2 399 aaPredicted RBP17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 EXOC6Q8TAG9 804 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 OSBP2Q969R2 916 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 GINM1Q9NU53 330 aa17.65■□□□□ 0.42
PPP1CA-201ENST00000312989 GH2P01242 217 aa17.64■□□□□ 0.41
PPP1CA-201ENST00000312989 SOX10P56693 466 aa17.64■□□□□ 0.41
PPP1CA-201ENST00000312989 MTMR2Q13614 643 aa17.64■□□□□ 0.41
PPP1CA-201ENST00000312989 TTC6Q86TZ1 520 aa17.64■□□□□ 0.41
PPP1CA-201ENST00000312989 TRIM47Q96LD4 638 aa17.64■□□□□ 0.41
PPP1CA-201ENST00000312989 MCM9Q9NXL9 1143 aa17.64■□□□□ 0.41
PPP1CA-201ENST00000312989 BACE1P56817 501 aa17.63■□□□□ 0.41
PPP1CA-201ENST00000312989 POTEEQ6S8J3 1075 aa17.63■□□□□ 0.41
PPP1CA-201ENST00000312989 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
PPP1CA-201ENST00000312989 SLC44A5Q8NCS7 719 aa17.63■□□□□ 0.41
PPP1CA-201ENST00000312989 ARMC5Q96C12 935 aa17.63■□□□□ 0.41
PPP1CA-201ENST00000312989 PTCH2Q9Y6C5 1203 aa17.63■□□□□ 0.41
PPP1CA-201ENST00000312989 TNRC18O15417 2968 aaPredicted RBP17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 MYH1P12882 1939 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 MKI67P46013 3256 aaKnown RBP17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 IGHDP01880 384 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 MX1P20591 662 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 AAMPQ13685 434 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 STRBPQ96SI9 672 aaKnown RBP17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 AS3MTQ9HBK9 375 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 EMILIN3Q9NT22 766 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 ATP8A2Q9NTI2 1148 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
PPP1CA-201ENST00000312989 C12orf60Q5U649 245 aa17.61■□□□□ 0.41
PPP1CA-201ENST00000312989 APPBP2Q92624 585 aa17.61■□□□□ 0.41
PPP1CA-201ENST00000312989 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
PPP1CA-201ENST00000312989 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
PPP1CA-201ENST00000312989 C12orf42Q96LP6 360 aa17.61■□□□□ 0.41
PPP1CA-201ENST00000312989 EPB41L4AQ9HCS5 686 aaPredicted RBP17.61■□□□□ 0.41
PPP1CA-201ENST00000312989 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 M0R2C6 588 aa17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 POLR3DP05423 398 aaPredicted RBP17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 OSBPP22059 807 aa17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 HOXA7P31268 230 aaPredicted RBP17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 CERKLQ49MI3 558 aaPredicted RBP17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 ACER1Q8TDN7 264 aa17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 ASCC2Q9H1I8 757 aaPredicted RBP17.6■□□□□ 0.41
PPP1CA-201ENST00000312989 USP17L10C9JJH3 530 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 FOXP2O15409 715 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 RNF113AO15541 343 aaKnown RBP17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 PSMC4P43686 418 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 ABCB5Q2M3G0 1257 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 SIAH1Q8IUQ4 282 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 ZNF333Q96JL9 665 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 TRIM34Q9BYJ4 488 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
PPP1CA-201ENST00000312989 A0A1W2PRG0 241 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 C19orf81C9J6K1 198 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 USP17L21D6R901 530 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 GNRH1P01148 92 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 PDE1AP54750 535 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 SRRDQ9UH36 339 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 MYH7P12883 1935 aa17.58■□□□□ 0.4
PPP1CA-201ENST00000312989 GPAA1O43292 621 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 PEX10O60683 326 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 SEPT2Q15019 361 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 FAM110CQ1W6H9 321 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 C16orf86Q6ZW13 317 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 KIAA1683Q9H0B3 1180 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 ROBO3Q96MS0 1386 aa17.57■□□□□ 0.4
PPP1CA-201ENST00000312989 POTEFA5A3E0 1075 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 ERC2O15083 957 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 ZFYP08048 801 aaPredicted RBP17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 AKR1B1P15121 316 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 TXNRD2Q9NNW7 524 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 MORF4L1Q9UBU8 362 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 SWAP70Q9UH65 585 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 PNMA3Q9UL41 463 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
PPP1CA-201ENST00000312989 CDK8P49336 464 aa17.55■□□□□ 0.4
PPP1CA-201ENST00000312989 PRMT2P55345 433 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms