RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 RRP1BQ14684 758 aaKnown RBP9.95□□□□□ -0.82
TPM3-203ENST00000312970 MTFR1Q15390 333 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 EAF2Q96CJ1 260 aaPredicted RBP9.95□□□□□ -0.82
TPM3-203ENST00000312970 AS3MTQ9HBK9 375 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 DBNLQ9UJU6 430 aaKnown RBP9.95□□□□□ -0.82
TPM3-203ENST00000312970 PNMA3Q9UL41 463 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 GABRQQ9UN88 632 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 PTPRFP10586 1907 aa9.95□□□□□ -0.82
TPM3-203ENST00000312970 DOCK1Q14185 1865 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 GJB1P08034 283 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 CCL5P13501 91 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 CYP7A1P22680 504 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 TREML2Q5T2D2 321 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 CEP85Q6P2H3 762 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 ADGRA1Q86SQ6 560 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 METTL16Q86W50 562 aaKnown RBP9.94□□□□□ -0.82
TPM3-203ENST00000312970 ERC1Q8IUD2 1116 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 MAPKAPK5Q8IW41 473 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 ANKRD13CQ8N6S4 541 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 SLAIN1Q8ND83 568 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 DPF3Q92784 378 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 COA7Q96BR5 231 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 WDR18Q9BV38 432 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 TRIM34Q9BYJ4 488 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 RNF208Q9H0X6 261 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 PRO3102Q9H379 93 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 PIH1D3Q9NQM4 214 aaKnown RBP9.94□□□□□ -0.82
TPM3-203ENST00000312970 PALD1Q9ULE6 856 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
TPM3-203ENST00000312970 PHIPQ8WWQ0 1821 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 FLT1P17948 1338 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 ZBED9Q6R2W3 1325 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 TNPO2O14787 897 aaKnown RBP9.93□□□□□ -0.82
TPM3-203ENST00000312970 ADCY3O60266 1144 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 IDH1O75874 414 aaKnown RBP9.93□□□□□ -0.82
TPM3-203ENST00000312970 ASNSP08243 561 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 GJA8P48165 433 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 GCLCP48506 637 aaPredicted RBP9.93□□□□□ -0.82
TPM3-203ENST00000312970 FLT3LGP49771 235 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 HMGCS2P54868 508 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 BACE1P56817 501 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 IRF5Q13568 498 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 FAM110CQ1W6H9 321 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 TMED8Q6PL24 325 aaPredicted RBP9.93□□□□□ -0.82
TPM3-203ENST00000312970 POTEHQ6S545 545 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 CERS3Q8IU89 383 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 CRACR2BQ8N4Y2 399 aaPredicted RBP9.93□□□□□ -0.82
TPM3-203ENST00000312970 PANK1Q8TE04 598 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 GINM1Q9NU53 330 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 TLR7Q9NYK1 1049 aaKnown RBP9.93□□□□□ -0.82
TPM3-203ENST00000312970 EXOC6BQ9Y2D4 811 aa9.93□□□□□ -0.82
TPM3-203ENST00000312970 C19orf81C9J6K1 198 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 SOX1O00570 391 aaPredicted RBP9.92□□□□□ -0.82
TPM3-203ENST00000312970 HLA-DOAP06340 250 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 CAPN2P17655 700 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 DYNLL1P63167 89 aaKnown RBP9.92□□□□□ -0.82
TPM3-203ENST00000312970 MAP3K12Q12852 859 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 AACSQ86V21 672 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 SHISA4Q96DD7 197 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 ASCC2Q9H1I8 757 aaPredicted RBP9.92□□□□□ -0.82
TPM3-203ENST00000312970 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
TPM3-203ENST00000312970 SAP30BPQ9UHR5 308 aaKnown RBP9.92□□□□□ -0.82
TPM3-203ENST00000312970 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
TPM3-203ENST00000312970 EYSQ5T1H1 3165 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 SGPL1O95470 568 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 ELNP15502 786 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 HOXA7P31268 230 aaPredicted RBP9.91□□□□□ -0.82
TPM3-203ENST00000312970 USP5P45974 858 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 JAG1P78504 1218 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 RPAP2Q8IXW5 612 aaPredicted RBP9.91□□□□□ -0.82
TPM3-203ENST00000312970 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 MIGA1Q8NAN2 632 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 UNC93B1Q9H1C4 597 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 ANTXR1Q9H6X2 564 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 DNAJC18Q9H819 358 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
TPM3-203ENST00000312970 MYO5AQ9Y4I1 1855 aaKnown RBP9.9□□□□□ -0.82
TPM3-203ENST00000312970 GDF11O95390 407 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 INHAP05111 366 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 IRX3P78415 501 aaPredicted RBP9.9□□□□□ -0.82
TPM3-203ENST00000312970 MTMR2Q13614 643 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.82
TPM3-203ENST00000312970 UBE2Q1Q7Z7E8 422 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 CLASRPQ8N2M8 674 aaKnown RBP9.9□□□□□ -0.82
TPM3-203ENST00000312970 RHPN1Q8TCX5 695 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 U2AF1L4Q8WU68 220 aaKnown RBP9.9□□□□□ -0.82
TPM3-203ENST00000312970 LRCH3Q96II8 777 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 P2RX7Q99572 595 aaKnown RBP9.9□□□□□ -0.82
TPM3-203ENST00000312970 HTATIP2Q9BUP3 242 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 IL1RAPL2Q9NP60 686 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
TPM3-203ENST00000312970 ABCB7O75027 752 aa9.89□□□□□ -0.83
TPM3-203ENST00000312970 HMMRO75330 724 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms