RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CTCFP49711 727 aaPredicted RBP14.47□□□□□ -0.09
SCFD1-201ENST00000311943 PPATQ06203 517 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 PPIL2Q13356 520 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 TREML2Q5T2D2 321 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 C12orf60Q5U649 245 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 TATDN1Q6P1N9 297 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 CWC27Q6UX04 472 aaKnown RBP14.47□□□□□ -0.09
SCFD1-201ENST00000311943 IFNL3Q8IZI9 196 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 ACER1Q8TDN7 264 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 HOOK2Q96ED9 719 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 PICK1Q9NRD5 415 aa14.47□□□□□ -0.09
SCFD1-201ENST00000311943 HERC5Q9UII4 1024 aaKnown RBP14.47□□□□□ -0.09
SCFD1-201ENST00000311943 CYP2C8P10632 490 aa14.46□□□□□ -0.09
SCFD1-201ENST00000311943 AKR1B1P15121 316 aa14.46□□□□□ -0.09
SCFD1-201ENST00000311943 GPAT2Q6NUI2 795 aa14.46□□□□□ -0.09
SCFD1-201ENST00000311943 ZBTB21Q9ULJ3 1066 aa14.46□□□□□ -0.09
SCFD1-201ENST00000311943 ZSWIM8A7E2V4 1837 aa14.46□□□□□ -0.09
SCFD1-201ENST00000311943 TESPA1A2RU30 521 aaPredicted RBP14.46□□□□□ -0.1
SCFD1-201ENST00000311943 SEPT2Q15019 361 aa14.46□□□□□ -0.1
SCFD1-201ENST00000311943 RAB3GAP1Q15042 981 aa14.46□□□□□ -0.1
SCFD1-201ENST00000311943 TTC6Q86TZ1 520 aa14.46□□□□□ -0.1
SCFD1-201ENST00000311943 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.1
SCFD1-201ENST00000311943 ATP8A2Q9NTI2 1148 aa14.46□□□□□ -0.1
SCFD1-201ENST00000311943 KCNH4Q9UQ05 1017 aa14.46□□□□□ -0.1
SCFD1-201ENST00000311943 ZFYP08048 801 aaPredicted RBP14.45□□□□□ -0.1
SCFD1-201ENST00000311943 HMGCS2P54868 508 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 CTDSPL2Q05D32 466 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 MTMR2Q13614 643 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 GADL1Q6ZQY3 521 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 ZNF296Q8WUU4 475 aaPredicted RBP14.45□□□□□ -0.1
SCFD1-201ENST00000311943 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 TRIM34Q9BYJ4 488 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 PTPRFP10586 1907 aa14.45□□□□□ -0.1
SCFD1-201ENST00000311943 A0A1W2PRG0 241 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 UNCXA6NJT0 531 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 MPHOSPH10O00566 681 aaKnown RBP14.44□□□□□ -0.1
SCFD1-201ENST00000311943 IGSF3O75054 1194 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 CDK8P49336 464 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 GTF2A2P52657 109 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 SREBF2Q12772 1141 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
SCFD1-201ENST00000311943 KIAA1755Q5JYT7 1200 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 SIAH1Q8IUQ4 282 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 PATL2C9JE40 543 aaKnown RBP14.44□□□□□ -0.1
SCFD1-201ENST00000311943 TDO2P48775 406 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.44□□□□□ -0.1
SCFD1-201ENST00000311943 EHD4Q9H223 541 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 LAMB1P07942 1786 aa14.44□□□□□ -0.1
SCFD1-201ENST00000311943 PDHXO00330 501 aa14.43□□□□□ -0.1
SCFD1-201ENST00000311943 HAND2P61296 217 aa14.43□□□□□ -0.1
SCFD1-201ENST00000311943 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
SCFD1-201ENST00000311943 CPA4Q9UI42 421 aa14.43□□□□□ -0.1
SCFD1-201ENST00000311943 A0A0G2JLL6 359 aaPredicted RBP14.42□□□□□ -0.1
SCFD1-201ENST00000311943 USP17L5A8MUK1 530 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 GPR25O00155 361 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 CENPBP07199 599 aaPredicted RBP14.42□□□□□ -0.1
SCFD1-201ENST00000311943 CETPP11597 493 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 CTGFP29279 349 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 TAF1CQ15572 869 aaPredicted RBP14.42□□□□□ -0.1
SCFD1-201ENST00000311943 ABCB5Q2M3G0 1257 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 MCMDC2Q4G0Z9 681 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 PRRT2Q7Z6L0 340 aaPredicted RBP14.42□□□□□ -0.1
SCFD1-201ENST00000311943 ZNF280CQ8ND82 737 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 HSPD1P10809 573 aaKnown RBP14.42□□□□□ -0.1
SCFD1-201ENST00000311943 POTEEQ6S8J3 1075 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 C16orf86Q6ZW13 317 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
SCFD1-201ENST00000311943 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
SCFD1-201ENST00000311943 FGAP02671 866 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 FAM47AQ5JRC9 791 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 TMED8Q6PL24 325 aaPredicted RBP14.41□□□□□ -0.1
SCFD1-201ENST00000311943 CERS3Q8IU89 383 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 CA12O43570 354 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 ASNSP08243 561 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 RASA1P20936 1047 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 NAPBQ9H115 298 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 HELLSQ9NRZ9 838 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 TAF6LQ9Y6J9 622 aa14.41□□□□□ -0.1
SCFD1-201ENST00000311943 CXCL11O14625 94 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 NMT2O60551 498 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 NEFLP07196 543 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 INHBEP58166 350 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 RASGRP2Q7LDG7 609 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 SAGE1Q9NXZ1 904 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
SCFD1-201ENST00000311943 CHMLP26374 656 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 PPARAQ07869 468 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 SPICE1Q8N0Z3 855 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 CD99L2Q8TCZ2 262 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 ARPP21Q9UBL0 812 aaPredicted RBP14.39□□□□□ -0.11
SCFD1-201ENST00000311943 BACE1P56817 501 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 PTH1RQ03431 593 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 COL9A3Q14050 684 aaPredicted RBP14.39□□□□□ -0.11
SCFD1-201ENST00000311943 PRDM10Q9NQV6 1147 aa14.39□□□□□ -0.11
SCFD1-201ENST00000311943 MKI67P46013 3256 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms