RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 GH2P01242 217 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 PTPRAP18433 802 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 GUCY1A2P33402 732 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 CERKLQ49MI3 558 aaPredicted RBP10.84□□□□□ -0.67
PDE4D-201ENST00000309641 NOL9Q5SY16 702 aaKnown RBP10.84□□□□□ -0.67
PDE4D-201ENST00000309641 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 TBC1D10CQ8IV04 446 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 AMOTL1Q8IY63 956 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 WNK4Q96J92 1243 aa10.84□□□□□ -0.67
PDE4D-201ENST00000309641 LSG1Q9H089 658 aaKnown RBP10.84□□□□□ -0.67
PDE4D-201ENST00000309641 ATAD5Q96QE3 1844 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 IRF6O14896 467 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 AKR1B1P15121 316 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 RASA1P20936 1047 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 ZBTB21Q9ULJ3 1066 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 ZHX2Q9Y6X8 837 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 DOCK1Q14185 1865 aa10.83□□□□□ -0.68
PDE4D-201ENST00000309641 DGKZQ13574 1117 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 ERO1BQ86YB8 467 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 MAP4K1Q92918 833 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 CCDC102AQ96A19 550 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDE4D-201ENST00000309641 ANO2Q9NQ90 1003 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 ANAPC4Q9UJX5 808 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 ZMYM6O95789 1325 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
PDE4D-201ENST00000309641 KIF23Q02241 960 aaPredicted RBP10.82□□□□□ -0.68
PDE4D-201ENST00000309641 SEPT2Q15019 361 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 ABCB5Q2M3G0 1257 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 PICK1Q9NRD5 415 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 SWAP70Q9UH65 585 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDE4D-201ENST00000309641 RBM8AQ9Y5S9 174 aaKnown RBP10.82□□□□□ -0.68
PDE4D-201ENST00000309641 PHIPQ8WWQ0 1821 aa10.82□□□□□ -0.68
PDE4D-201ENST00000309641 ASNSP08243 561 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 CYP21A2P08686 494 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 ECE1P42892 770 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 COL9A3Q14050 684 aaPredicted RBP10.81□□□□□ -0.68
PDE4D-201ENST00000309641 RAB3GAP1Q15042 981 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 MYH8P13535 1937 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 NEDD4P46934 1319 aa10.81□□□□□ -0.68
PDE4D-201ENST00000309641 TRIM75PA6NK02 468 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 ZNF213O14771 459 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 PPATQ06203 517 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 SPP2Q13103 211 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 NOGQ13253 232 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 ACER1Q8TDN7 264 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 AFG3L2Q9Y4W6 797 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 USP17L5A8MUK1 530 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 FGRP09769 529 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 ZBTB48P10074 688 aaPredicted RBP10.8□□□□□ -0.68
PDE4D-201ENST00000309641 PPIL2Q13356 520 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
PDE4D-201ENST00000309641 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 KIAA1211Q6ZU35 1233 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 PTPN18Q99952 460 aa10.8□□□□□ -0.68
PDE4D-201ENST00000309641 LAMA4Q16363 1823 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 A0A1W2PRG0 241 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 NMT2O60551 498 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 SEC24BO95487 1268 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 PDE4BQ07343 736 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 MOGSQ13724 837 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 NECTIN1Q15223 517 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 IMMTQ16891 758 aaKnown RBP10.79□□□□□ -0.68
PDE4D-201ENST00000309641 AKNAD1Q5T1N1 836 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 STOX1Q6ZVD7 989 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 BRI3BPQ8WY22 251 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 CCDC17Q96LX7 622 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 TOMM22Q9NS69 142 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
PDE4D-201ENST00000309641 IGF2BP3O00425 579 aaKnown RBP eCLIP10.79□□□□□ -0.68
PDE4D-201ENST00000309641 RANBP6O60518 1105 aaKnown RBP10.79□□□□□ -0.68
PDE4D-201ENST00000309641 TFAP4Q01664 338 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 MTMR2Q13614 643 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 ZNF444Q8N0Y2 327 aaPredicted RBP10.79□□□□□ -0.68
PDE4D-201ENST00000309641 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 STAG1Q8WVM7 1258 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 CABP5Q9NP86 173 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 CTNNA3Q9UI47 895 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 KCNH4Q9UQ05 1017 aa10.79□□□□□ -0.68
PDE4D-201ENST00000309641 PTPRFP10586 1907 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 GREB1LQ9C091 1923 aaPredicted RBP10.78□□□□□ -0.68
PDE4D-201ENST00000309641 THSD7BQ9C0I4 1608 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 B4E1Z4 1266 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 SLC27A2O14975 620 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 ORC4O43929 436 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 SLC3A2P08195 630 aaKnown RBP10.78□□□□□ -0.68
PDE4D-201ENST00000309641 MAP2K2P36507 400 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 HMGCS2P54868 508 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
PDE4D-201ENST00000309641 CCL15Q16663 113 aa10.78□□□□□ -0.68
PDE4D-201ENST00000309641 KIAA1755Q5JYT7 1200 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms