RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 RGS3P49796 1198 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 CACNB3P54284 484 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 GYS2P54840 703 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 DYNLL1P63167 89 aaKnown RBP9.79□□□□□ -0.84
CHD6-201ENST00000309279 RASA3Q14644 834 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 DNAJC14Q6Y2X3 702 aaPredicted RBP9.79□□□□□ -0.84
CHD6-201ENST00000309279 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 SH3RF3Q8TEJ3 882 aaPredicted RBP9.79□□□□□ -0.84
CHD6-201ENST00000309279 TEPSINQ96N21 525 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 ARHGEF10LQ9HCE6 1279 aa9.79□□□□□ -0.84
CHD6-201ENST00000309279 DDX4Q9NQI0 724 aaKnown RBP9.79□□□□□ -0.84
CHD6-201ENST00000309279 SCAF8Q9UPN6 1271 aaKnown RBP9.79□□□□□ -0.84
CHD6-201ENST00000309279 RPAP1Q9BWH6 1393 aaPredicted RBP9.79□□□□□ -0.84
CHD6-201ENST00000309279 hCG_2014768A0A024R1R8 64 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 TRAF5O00463 557 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 ZNF500O60304 480 aaPredicted RBP9.78□□□□□ -0.84
CHD6-201ENST00000309279 PTPROQ16827 1216 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 DLK2Q6UY11 383 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 C11orf96Q7Z7L8 435 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 AMOTL1Q8IY63 956 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 TEX11Q8IYF3 940 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 FAM151AQ8WW52 585 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 STRBPQ96SI9 672 aaKnown RBP9.78□□□□□ -0.84
CHD6-201ENST00000309279 HELLSQ9NRZ9 838 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 MKRN1Q9UHC7 482 aaKnown RBP9.78□□□□□ -0.84
CHD6-201ENST00000309279 COL2A1P02458 1487 aaPredicted RBP9.78□□□□□ -0.84
CHD6-201ENST00000309279 ATRNL1Q5VV63 1379 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 HIP1O00291 1037 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 EGFLAMQ63HQ2 1017 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 ZFPM1Q8IX07 1006 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 TGFBRAP1Q8WUH2 860 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 KCNB2Q92953 911 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 AIDAQ96BJ3 306 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 CDCA5Q96FF9 252 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 TMEM39BQ9GZU3 492 aa9.78□□□□□ -0.84
CHD6-201ENST00000309279 TMA7Q9Y2S6 64 aaKnown RBP9.78□□□□□ -0.84
CHD6-201ENST00000309279 MYH1P12882 1939 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 FLT1P17948 1338 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 M0R2C6 588 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 GPAA1O43292 621 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 ZRANB2O95218 330 aaKnown RBP eCLIP9.77□□□□□ -0.85
CHD6-201ENST00000309279 MBD4O95243 580 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 C1QTNF8P60827 252 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.85
CHD6-201ENST00000309279 TCP10Q12799 353 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 MCMDC2Q4G0Z9 681 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 PRAMEF18Q5VWM3 479 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 CST9Q5W186 159 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 PLCD3Q8N3E9 789 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 MKL1Q969V6 931 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 FAM227BQ96M60 508 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 SEC62Q99442 399 aaKnown RBP9.77□□□□□ -0.85
CHD6-201ENST00000309279 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
CHD6-201ENST00000309279 OSBPL5Q9H0X9 879 aaPredicted RBP9.77□□□□□ -0.85
CHD6-201ENST00000309279 ARMT1Q9H993 441 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 ATP8A2Q9NTI2 1148 aa9.77□□□□□ -0.85
CHD6-201ENST00000309279 A0A0D9SFI3 127 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 GNAT2P19087 354 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 CHMLP26374 656 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
CHD6-201ENST00000309279 PICALMQ13492 652 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 SETDB1Q15047 1291 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 NBPF12Q5TAG4 269 aaPredicted RBP9.76□□□□□ -0.85
CHD6-201ENST00000309279 SH3BP5LQ7L8J4 393 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 GPIHBP1Q8IV16 184 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 CDAN1Q8IWY9 1227 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
CHD6-201ENST00000309279 DHX36Q9H2U1 1008 aaKnown RBP9.76□□□□□ -0.85
CHD6-201ENST00000309279 DCP1AQ9NPI6 582 aaPredicted RBP9.76□□□□□ -0.85
CHD6-201ENST00000309279 DDX60LQ5H9U9 1706 aaKnown RBP9.75□□□□□ -0.85
CHD6-201ENST00000309279 BAZ2AQ9UIF9 1905 aaKnown RBP9.75□□□□□ -0.85
CHD6-201ENST00000309279 CEP350Q5VT06 3117 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 GOLGA6CA6NDK9 693 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 GOLGA6BA6NDN3 693 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 DDTLA6NHG4 134 aaPredicted RBP9.75□□□□□ -0.85
CHD6-201ENST00000309279 GSG1L2A8MUP6 293 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 PRKAB2O43741 272 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 CELF2O95319 508 aaKnown RBP9.75□□□□□ -0.85
CHD6-201ENST00000309279 GOLGA6DP0CG33 693 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 USP5P45974 858 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 FKBP1BP68106 108 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 CWC27Q6UX04 472 aaKnown RBP9.75□□□□□ -0.85
CHD6-201ENST00000309279 GET4Q7L5D6 327 aaPredicted RBP9.75□□□□□ -0.85
CHD6-201ENST00000309279 MAPKAPK5Q8IW41 473 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 OTUD6BQ8N6M0 293 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 SDR42E1Q8WUS8 393 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 SPACA7Q96KW9 195 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 DIAPH3Q9NSV4 1193 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 GOLGA6AQ9NYA3 693 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 SSC5DA1L4H1 1573 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 PCNTO95613 3336 aa9.75□□□□□ -0.85
CHD6-201ENST00000309279 DHX16O60231 1041 aaKnown RBP9.74□□□□□ -0.85
CHD6-201ENST00000309279 NF2P35240 595 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 E2F4Q16254 413 aa9.74□□□□□ -0.85
CHD6-201ENST00000309279 MAP3K11Q16584 847 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms