RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 TULP2O00295 520 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 ACTN2P35609 894 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 FCHSD1Q86WN1 690 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 MLKLQ8NB16 471 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 TSPYL1Q9H0U9 437 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 MCAMP43121 646 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 CDC23Q9UJX2 597 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 ADGRG1Q9Y653 693 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 CRYBG1Q9Y4K1 1723 aa16.34■□□□□ 0.21
SCUBE2-201ENST00000309263 SH2B2O14492 632 aaPredicted RBP16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 PRDM1O75626 825 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 CASP7P55210 303 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 CEP112Q8N8E3 955 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 MIGA1Q8NAN2 632 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 GOLGA5Q8TBA6 731 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 CTNND2Q9UQB3 1225 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.21
SCUBE2-201ENST00000309263 PPARDQ03181 441 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 CAGE1Q8TC20 777 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 ARMT1Q9H993 441 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 TAB2Q9NYJ8 693 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 SYNRGQ9UMZ2 1314 aa16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.2
SCUBE2-201ENST00000309263 RTN1Q16799 776 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 RFX7Q2KHR2 1363 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 BRD3Q15059 726 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 ZNF174Q15697 407 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 NOA1Q8NC60 698 aaKnown RBP16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 RIN2Q8WYP3 895 aaPredicted RBP16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 PCMTD1Q96MG8 357 aaPredicted RBP16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 ANKZF1Q9H8Y5 726 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 MRPS25P82663 173 aaKnown RBP16.32■□□□□ 0.2
SCUBE2-201ENST00000309263 SRGAP2O75044 1071 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 MBD4O95243 580 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 FXR1P51114 621 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 CASP8Q14790 479 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 DNAJC21Q5F1R6 531 aaKnown RBP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 RRAGBQ5VZM2 374 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 GSPT2Q8IYD1 628 aaKnown RBP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 ENOX1Q8TC92 643 aaKnown RBP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 PRKAB2O43741 272 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 BAZ2BQ9UIF8 2168 aaKnown RBP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
SCUBE2-201ENST00000309263 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 WTAPQ15007 396 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 PHKA1P46020 1223 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 BEND6Q5SZJ8 279 aaPredicted RBP16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 TOM1L2Q6ZVM7 507 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 SRLQ86TD4 932 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 DRC1Q96MC2 740 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 KRT9P35527 623 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 TBX2Q13207 712 aaPredicted RBP16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 MED15Q96RN5 788 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 PLIN2Q99541 437 aa16.3■□□□□ 0.2
SCUBE2-201ENST00000309263 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 PLCD1P51178 756 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 NR1I3Q14994 352 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 ITGA6P23229 1130 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 RILPL1Q5EBL4 403 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
SCUBE2-201ENST00000309263 NFAT5O94916 1531 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 PDE6AP16499 860 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 TTC19Q6DKK2 380 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 PSMB7Q99436 277 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 ABCF2Q9UG63 623 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 MMP1P03956 469 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 EVA1CP58658 441 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 WASF1Q92558 559 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 SYMPKQ92797 1274 aaKnown RBP16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 GREM2Q9H772 168 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms