RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 RTFDC1Q9BY42 306 aaPredicted RBP27.86■■■□□ 2.05
RFWD2-201ENST00000308769 CTAGE5O15320 804 aa27.86■■■□□ 2.05
RFWD2-201ENST00000308769 PLEKHA8P1O95397 391 aa27.86■■■□□ 2.05
RFWD2-201ENST00000308769 BAG3O95817 575 aa27.86■■■□□ 2.05
RFWD2-201ENST00000308769 C12orf60Q5U649 245 aa27.86■■■□□ 2.05
RFWD2-201ENST00000308769 DIS3L2Q8IYB7 885 aaKnown RBP27.86■■■□□ 2.05
RFWD2-201ENST00000308769 MAP3K14Q99558 947 aa27.86■■■□□ 2.05
RFWD2-201ENST00000308769 RNF26Q9BY78 433 aaPredicted RBP27.86■■■□□ 2.05
RFWD2-201ENST00000308769 TSPY2A6NKD2 308 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 WDHD1O75717 1129 aaPredicted RBP27.85■■■□□ 2.05
RFWD2-201ENST00000308769 NOSTRINQ8IVI9 506 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 TGFBRAP1Q8WUH2 860 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 CBX8Q9HC52 389 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 COL11A2P13942 1736 aaPredicted RBP27.85■■■□□ 2.05
RFWD2-201ENST00000308769 PPP4CP60510 307 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 FUT2Q10981 343 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 PTPAQ15257 358 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 DYNLL2Q96FJ2 89 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 NOL10Q9BSC4 688 aaKnown RBP27.85■■■□□ 2.05
RFWD2-201ENST00000308769 DNAJC25Q9H1X3 360 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 CCDC39Q9UFE4 941 aa27.85■■■□□ 2.05
RFWD2-201ENST00000308769 BAZ2BQ9UIF8 2168 aaKnown RBP27.85■■■□□ 2.05
RFWD2-201ENST00000308769 MFSD14BQ5SR56 506 aa27.84■■■□□ 2.05
RFWD2-201ENST00000308769 NLGN1Q8N2Q7 840 aa27.84■■■□□ 2.05
RFWD2-201ENST00000308769 DDAH1O94760 285 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 LDHCP07864 332 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 HMGB2P26583 209 aaKnown RBP27.83■■■□□ 2.05
RFWD2-201ENST00000308769 SAFBQ15424 915 aaKnown RBP eCLIP27.83■■■□□ 2.05
RFWD2-201ENST00000308769 SHISA4Q96DD7 197 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.83■■■□□ 2.05
RFWD2-201ENST00000308769 NOL7Q9UMY1 257 aaKnown RBP27.83■■■□□ 2.05
RFWD2-201ENST00000308769 hCG_1642624A0A1W2PR95 340 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 CALM1P0DP23 149 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 CALM2P0DP24 149 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 CALM3P0DP25 149 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 BTDP43251 543 aa27.83■■■□□ 2.05
RFWD2-201ENST00000308769 ERCC4Q92889 916 aaPredicted RBP27.83■■■□□ 2.05
RFWD2-201ENST00000308769 PTMAP06454 111 aaKnown RBP27.82■■■□□ 2.04
RFWD2-201ENST00000308769 PKN1Q16512 942 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 SP8Q8IXZ3 490 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 RBM28Q9NW13 759 aaKnown RBP27.82■■■□□ 2.04
RFWD2-201ENST00000308769 DDX60LQ5H9U9 1706 aaKnown RBP27.82■■■□□ 2.04
RFWD2-201ENST00000308769 ROBO3Q96MS0 1386 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 SRGNP10124 158 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 MSNP26038 577 aaKnown RBP27.82■■■□□ 2.04
RFWD2-201ENST00000308769 AKAP17AQ02040 695 aaKnown RBP27.82■■■□□ 2.04
RFWD2-201ENST00000308769 NR5A1Q13285 461 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 OLFM4Q6UX06 510 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 MAPKAPK5Q8IW41 473 aa27.82■■■□□ 2.04
RFWD2-201ENST00000308769 FOXP1Q9H334 677 aaPredicted RBP27.81■■■□□ 2.04
RFWD2-201ENST00000308769 ATP6V0A2Q9Y487 856 aa27.81■■■□□ 2.04
RFWD2-201ENST00000308769 PPP6R2O75170 966 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 ZNF165P49910 485 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 RCSD1Q6JBY9 416 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 TMC4Q7Z404 712 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 OXER1Q8TDS5 423 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 VPS54Q9P1Q0 977 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 SAP30BPQ9UHR5 308 aaKnown RBP27.8■■■□□ 2.04
RFWD2-201ENST00000308769 MYH1P12882 1939 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 A0A087WWV3 80 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 RIMBP2O15034 1052 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 PFKFB1P16118 471 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 CMA1P23946 247 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 TOB1P50616 345 aaPredicted RBP27.8■■■□□ 2.04
RFWD2-201ENST00000308769 TFAP4Q01664 338 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 TMTC3Q6ZXV5 915 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 MPNDQ8N594 471 aa27.8■■■□□ 2.04
RFWD2-201ENST00000308769 V9GY48 417 aaPredicted RBP27.8■■■□□ 2.04
RFWD2-201ENST00000308769 PRPF3O43395 683 aaKnown RBP27.79■■■□□ 2.04
RFWD2-201ENST00000308769 MMP10P09238 476 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 PLCD1P51178 756 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 C11orf57Q6ZUT1 292 aaPredicted RBP27.79■■■□□ 2.04
RFWD2-201ENST00000308769 SDF4Q9BRK5 362 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 TNS1Q9HBL0 1735 aaKnown RBP27.79■■■□□ 2.04
RFWD2-201ENST00000308769 GPR75-ASB3A0A0A6YYF3 556 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 SLC44A5Q8NCS7 719 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 IL17RBQ9NRM6 502 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 ZKSCAN5Q9Y2L8 839 aa27.79■■■□□ 2.04
RFWD2-201ENST00000308769 CNTNAP5Q8WYK1 1306 aa27.78■■■□□ 2.04
RFWD2-201ENST00000308769 STX1AQ16623 288 aa27.78■■■□□ 2.04
RFWD2-201ENST00000308769 AMOTL1Q8IY63 956 aa27.78■■■□□ 2.04
RFWD2-201ENST00000308769 JMYQ8N9B5 988 aa27.78■■■□□ 2.04
RFWD2-201ENST00000308769 CTCFLQ8NI51 663 aaPredicted RBP27.78■■■□□ 2.04
RFWD2-201ENST00000308769 FOCADQ5VW36 1801 aa27.78■■■□□ 2.04
RFWD2-201ENST00000308769 ZNF202O95125 648 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 MSL1Q68DK7 614 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 NPR1P16066 1061 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 GTF2IP78347 998 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 SHC4Q6S5L8 630 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 SRBD1Q8N5C6 995 aaKnown RBP27.77■■■□□ 2.04
RFWD2-201ENST00000308769 TBC1D22AQ8WUA7 517 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 CLIC6Q96NY7 704 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 MKNK2Q9HBH9 465 aa27.77■■■□□ 2.04
RFWD2-201ENST00000308769 TEX11Q8IYF3 940 aa27.76■■■□□ 2.03
RFWD2-201ENST00000308769 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.76■■■□□ 2.03
RFWD2-201ENST00000308769 FAM205AQ6ZU69 1335 aa27.75■■■□□ 2.03
RFWD2-201ENST00000308769 XBP1P17861 261 aa27.75■■■□□ 2.03
RFWD2-201ENST00000308769 CERS3Q8IU89 383 aa27.75■■■□□ 2.03
RFWD2-201ENST00000308769 PHF20Q9BVI0 1012 aa27.75■■■□□ 2.03
RFWD2-201ENST00000308769 USP17L3A6NCW0 530 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms