RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 RPRD2Q5VT52 1461 aaKnown RBP21.33■■□□□ 1
BPTF-201ENST00000306378 MYH8P13535 1937 aa21.32■■□□□ 1
BPTF-201ENST00000306378 HARSP12081 509 aaKnown RBP21.32■■□□□ 1
BPTF-201ENST00000306378 TMTC3Q6ZXV5 915 aa21.32■■□□□ 1
BPTF-201ENST00000306378 LRGUKQ96M69 825 aa21.32■■□□□ 1
BPTF-201ENST00000306378 MX2P20592 715 aa21.32■■□□□ 1
BPTF-201ENST00000306378 EIF3BP55884 814 aaKnown RBP21.32■■□□□ 1
BPTF-201ENST00000306378 BRF1Q92994 677 aa21.32■■□□□ 1
BPTF-201ENST00000306378 FLIIQ13045 1269 aa21.32■■□□□ 1
BPTF-201ENST00000306378 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
BPTF-201ENST00000306378 NESP48681 1621 aa21.32■■□□□ 1
BPTF-201ENST00000306378 CALUO43852 315 aaPredicted RBP21.32■■□□□ 1
BPTF-201ENST00000306378 IFT88Q13099 833 aa21.32■■□□□ 1
BPTF-201ENST00000306378 TAF11Q15544 211 aa21.32■■□□□ 1
BPTF-201ENST00000306378 CCDC105Q8IYK2 499 aa21.32■■□□□ 1
BPTF-201ENST00000306378 RUBCNQ92622 972 aa21.32■■□□□ 1
BPTF-201ENST00000306378 CACNA1FO60840 1977 aa21.32■■□□□ 1
BPTF-201ENST00000306378 NOC4LQ9BVI4 516 aaKnown RBP21.32■■□□□ 1
BPTF-201ENST00000306378 RIC8AQ9NPQ8 531 aa21.32■■□□□ 1
BPTF-201ENST00000306378 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
BPTF-201ENST00000306378 BCRP11274 1271 aa21.31■■□□□ 1
BPTF-201ENST00000306378 OGFOD1Q8N543 542 aa21.31■■□□□ 1
BPTF-201ENST00000306378 KRT12Q99456 494 aa21.31■■□□□ 1
BPTF-201ENST00000306378 MRPL46Q9H2W6 279 aaKnown RBP21.31■■□□□ 1
BPTF-201ENST00000306378 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
BPTF-201ENST00000306378 ATF3P18847 181 aa21.31■■□□□ 1
BPTF-201ENST00000306378 SLC8A3P57103 927 aa21.31■■□□□ 1
BPTF-201ENST00000306378 RAPGEF1Q13905 1077 aa21.31■■□□□ 1
BPTF-201ENST00000306378 MUM1L1Q5H9M0 696 aa21.31■■□□□ 1
BPTF-201ENST00000306378 IFIT1BQ5T764 474 aaKnown RBP21.31■■□□□ 1
BPTF-201ENST00000306378 ISM2Q6H9L7 571 aa21.31■■□□□ 1
BPTF-201ENST00000306378 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
BPTF-201ENST00000306378 PAK1Q13153 545 aa21.31■■□□□ 1
BPTF-201ENST00000306378 PIP4K2CQ8TBX8 421 aa21.31■■□□□ 1
BPTF-201ENST00000306378 SYNJ1O43426 1573 aa21.31■■□□□ 1
BPTF-201ENST00000306378 CUL4BQ13620 913 aa21.31■■□□□ 1
BPTF-201ENST00000306378 TRIM15Q9C019 465 aa21.31■■□□□ 1
BPTF-201ENST00000306378 CTNND2Q9UQB3 1225 aa21.31■■□□□ 1
BPTF-201ENST00000306378 CCT5P48643 541 aa21.31■■□□□ 1
BPTF-201ENST00000306378 ASIC2Q16515 512 aa21.31■■□□□ 1
BPTF-201ENST00000306378 ENAHQ8N8S7 591 aaPredicted RBP21.31■■□□□ 1
BPTF-201ENST00000306378 TBC1D8O95759 1140 aa21.31■■□□□ 1
BPTF-201ENST00000306378 PASKQ96RG2 1323 aa21.31■■□□□ 1
BPTF-201ENST00000306378 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.3■■□□□ 1
BPTF-201ENST00000306378 WDR44Q5JSH3 913 aa21.3■■□□□ 1
BPTF-201ENST00000306378 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
BPTF-201ENST00000306378 RNF14Q9UBS8 474 aa21.3■■□□□ 1
BPTF-201ENST00000306378 TMEM110-MUSTN1A8MSY1 372 aa21.3■■□□□ 1
BPTF-201ENST00000306378 RBM5P52756 815 aaKnown RBP eCLIP21.3■■□□□ 1
BPTF-201ENST00000306378 MCMDC2Q4G0Z9 681 aa21.3■■□□□ 1
BPTF-201ENST00000306378 INSRP06213 1382 aa21.3■■□□□ 1
BPTF-201ENST00000306378 OCA2Q04671 838 aa21.3■■□□□ 1
BPTF-201ENST00000306378 C20orf194Q5TEA3 1177 aa21.3■■□□□ 1
BPTF-201ENST00000306378 B4DLN1 442 aa21.3■■□□□ 1
BPTF-201ENST00000306378 MRPL12P52815 198 aaKnown RBP21.3■■□□□ 1
BPTF-201ENST00000306378 KLF18A0A0U1RQI7 1052 aa21.3■■□□□ 1
BPTF-201ENST00000306378 SAMM50Q9Y512 469 aa21.3■■□□□ 1
BPTF-201ENST00000306378 DCTN3O75935 186 aa21.29■■□□□ 1
BPTF-201ENST00000306378 KRT79Q5XKE5 535 aa21.29■■□□□ 1
BPTF-201ENST00000306378 MIS18AQ9NYP9 233 aa21.29■■□□□ 1
BPTF-201ENST00000306378 SOS1Q07889 1333 aaPredicted RBP21.29■■□□□ 1
BPTF-201ENST00000306378 EIF3DO15371 548 aaKnown RBP eCLIP21.29■■□□□ 12e-6■■□□□ 11.4
BPTF-201ENST00000306378 DTHD1Q6ZMT9 781 aa21.29■■□□□ 1
BPTF-201ENST00000306378 HYOU1Q9Y4L1 999 aa21.29■■□□□ 1
BPTF-201ENST00000306378 CAPRIN2Q6IMN6 1127 aaKnown RBP21.29■■□□□ 1
BPTF-201ENST00000306378 LRRC8CQ8TDW0 803 aa21.29■■□□□ 1
BPTF-201ENST00000306378 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
BPTF-201ENST00000306378 NLRP12P59046 1061 aa21.29■■□□□ 1
BPTF-201ENST00000306378 TBC1D8BQ0IIM8 1120 aa21.29■■□□□ 1
BPTF-201ENST00000306378 PSPC1Q8WXF1 523 aaKnown RBP21.29■■□□□ 1
BPTF-201ENST00000306378 CUTAO60888 179 aa21.29■■□□□ 1
BPTF-201ENST00000306378 RPS6KA2Q15349 733 aa21.29■■□□□ 1
BPTF-201ENST00000306378 ARHGEF18Q6ZSZ5 1173 aa21.29■■□□□ 1
BPTF-201ENST00000306378 CHGBP05060 677 aa21.28■■□□□ 1
BPTF-201ENST00000306378 CCDC13Q8IYE1 715 aa21.28■■□□□ 1
BPTF-201ENST00000306378 MRPL40Q9NQ50 206 aaKnown RBP21.28■■□□□ 1
BPTF-201ENST00000306378 GUCY2CP25092 1073 aa21.28■■□□□ 1
BPTF-201ENST00000306378 MYO18AQ92614 2054 aaKnown RBP21.28■■□□□ 1
BPTF-201ENST00000306378 THAP12O43422 761 aa21.28■■□□□ 1
BPTF-201ENST00000306378 NCBP1Q09161 790 aaKnown RBP21.28■■□□□ 1
BPTF-201ENST00000306378 STRN3Q13033 797 aa21.28■■□□□ 1
BPTF-201ENST00000306378 NBPF20Q3BBV1 942 aa21.28■■□□□ 1
BPTF-201ENST00000306378 HLA-DOAP06340 250 aa21.28■■□□□ 1
BPTF-201ENST00000306378 ABCF2Q9UG63 623 aa21.28■■□□□ 1
BPTF-201ENST00000306378 MARCKSP29966 332 aaPredicted RBP21.28■■□□□ 1
BPTF-201ENST00000306378 CCT6AP40227 531 aaKnown RBP21.28■■□□□ 1
BPTF-201ENST00000306378 KRT80Q6KB66 452 aa21.28■■□□□ 1
BPTF-201ENST00000306378 PPP1R12AO14974 1030 aaPredicted RBP21.28■■□□□ 1
BPTF-201ENST00000306378 KIF11P52732 1056 aa21.28■■□□□ 1
BPTF-201ENST00000306378 HDAC4P56524 1084 aa21.28■■□□□ 1
BPTF-201ENST00000306378 RASSF10A6NK89 507 aa21.28■■□□□ 1
BPTF-201ENST00000306378 PDE1AP54750 535 aa21.28■■□□□ 1
BPTF-201ENST00000306378 ETF1P62495 437 aaKnown RBP21.28■■□□□ 1
BPTF-201ENST00000306378 SFMBT2Q5VUG0 894 aa21.28■■□□□ 1
BPTF-201ENST00000306378 SCYL3Q8IZE3 742 aa21.27■■□□□ 1
BPTF-201ENST00000306378 PPP2R5BQ15173 497 aa21.27■■□□□ 1
BPTF-201ENST00000306378 BAG2O95816 211 aa21.27■■□□□ 1
BPTF-201ENST00000306378 NUTM2GQ5VZR2 741 aa21.27■■□□□ 1
BPTF-201ENST00000306378 SH2D4AQ9H788 454 aa21.27■■□□□ 1
BPTF-201ENST00000306378 SMARCA5O60264 1052 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms