RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 APBB1O00213 710 aa24.99■■□□□ 1.59
RER1-201ENST00000306256 INHAP05111 366 aa24.99■■□□□ 1.59
RER1-201ENST00000306256 GJA8P48165 433 aa24.99■■□□□ 1.59
RER1-201ENST00000306256 GCLCP48506 637 aaPredicted RBP24.99■■□□□ 1.59
RER1-201ENST00000306256 DDX60LQ5H9U9 1706 aaKnown RBP24.99■■□□□ 1.59
RER1-201ENST00000306256 HABP4Q5JVS0 413 aaKnown RBP24.99■■□□□ 1.59
RER1-201ENST00000306256 NKX2-3Q8TAU0 364 aa24.99■■□□□ 1.59
RER1-201ENST00000306256 RHPN1Q8TCX5 695 aa24.99■■□□□ 1.59
RER1-201ENST00000306256 COA7Q96BR5 231 aa24.99■■□□□ 1.59
RER1-201ENST00000306256 USP5P45974 858 aa24.98■■□□□ 1.59
RER1-201ENST00000306256 BACE1P56817 501 aa24.98■■□□□ 1.59
RER1-201ENST00000306256 IRF5Q13568 498 aa24.98■■□□□ 1.59
RER1-201ENST00000306256 COG6Q9Y2V7 657 aa24.98■■□□□ 1.59
RER1-201ENST00000306256 IRX3P78415 501 aaPredicted RBP24.97■■□□□ 1.59
RER1-201ENST00000306256 MAP3K12Q12852 859 aa24.97■■□□□ 1.59
RER1-201ENST00000306256 PXYLP1Q8TE99 480 aa24.97■■□□□ 1.59
RER1-201ENST00000306256 BCL11AQ9H165 835 aa24.97■■□□□ 1.59
RER1-201ENST00000306256 TMOD4Q9NZQ9 345 aa24.97■■□□□ 1.59
RER1-201ENST00000306256 TRIOBPQ9H2D6 2365 aa24.97■■□□□ 1.59
RER1-201ENST00000306256 PEX10O60683 326 aa24.96■■□□□ 1.59
RER1-201ENST00000306256 MS4A1P11836 297 aa24.96■■□□□ 1.59
RER1-201ENST00000306256 HSP90AB4PQ58FF6 505 aa24.96■■□□□ 1.59
RER1-201ENST00000306256 U2AF1L4Q8WU68 220 aaKnown RBP24.96■■□□□ 1.59
RER1-201ENST00000306256 H0YGN5 161 aa24.95■■□□□ 1.58
RER1-201ENST00000306256 USP17L10C9JJH3 530 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 GH2P01242 217 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 UBE2Q1Q7Z7E8 422 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 CERS3Q8IU89 383 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 SIRT2Q8IXJ6 389 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 P2RX7Q99572 595 aaKnown RBP24.94■■□□□ 1.58
RER1-201ENST00000306256 GINM1Q9NU53 330 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 MYH8P13535 1937 aa24.94■■□□□ 1.58
RER1-201ENST00000306256 MYH7P12883 1935 aa24.93■■□□□ 1.58
RER1-201ENST00000306256 C19orf81C9J6K1 198 aa24.93■■□□□ 1.58
RER1-201ENST00000306256 CLASRPQ8N2M8 674 aaKnown RBP24.93■■□□□ 1.58
RER1-201ENST00000306256 KIF1BPQ96EK5 621 aa24.93■■□□□ 1.58
RER1-201ENST00000306256 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
RER1-201ENST00000306256 DDX19BQ9UMR2 479 aa24.93■■□□□ 1.58
RER1-201ENST00000306256 FARP2O94887 1054 aaPredicted RBP24.92■■□□□ 1.58
RER1-201ENST00000306256 SGPL1O95470 568 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 HOXA7P31268 230 aaPredicted RBP24.92■■□□□ 1.58
RER1-201ENST00000306256 RPAP2Q8IXW5 612 aaPredicted RBP24.92■■□□□ 1.58
RER1-201ENST00000306256 DPF3Q92784 378 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 DEFB118Q96PH6 123 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 RIOK1Q9BRS2 568 aaKnown RBP24.92■■□□□ 1.58
RER1-201ENST00000306256 TXNRD2Q9NNW7 524 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 EMILIN3Q9NT22 766 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 MORF4L1Q9UBU8 362 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 SERPINB13Q9UIV8 391 aa24.92■■□□□ 1.58
RER1-201ENST00000306256 COLQQ9Y215 455 aaPredicted RBP24.92■■□□□ 1.58
RER1-201ENST00000306256 BAZ2AQ9UIF9 1905 aaKnown RBP24.92■■□□□ 1.58
RER1-201ENST00000306256 ALPK3Q96L96 1907 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 HMMRO75330 724 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 PDE6AP16499 860 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 HERVK_113P62684 666 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 TATDN1Q6P1N9 297 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 DNAJC2Q99543 621 aaKnown RBP24.91■■□□□ 1.58
RER1-201ENST00000306256 EHD4Q9H223 541 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 GJD2Q9UKL4 321 aa24.91■■□□□ 1.58
RER1-201ENST00000306256 MAGEB6P1A0A0J9YX57 407 aa24.9■■□□□ 1.58
RER1-201ENST00000306256 GOLIM4O00461 696 aa24.9■■□□□ 1.58
RER1-201ENST00000306256 IFIT2P09913 472 aaKnown RBP24.9■■□□□ 1.58
RER1-201ENST00000306256 TTF1Q15361 905 aaPredicted RBP24.9■■□□□ 1.58
RER1-201ENST00000306256 ZYXQ15942 572 aaKnown RBP24.9■■□□□ 1.58
RER1-201ENST00000306256 SLC9C2Q5TAH2 1124 aa24.9■■□□□ 1.58
RER1-201ENST00000306256 EDC3Q96F86 508 aaKnown RBP24.9■■□□□ 1.58
RER1-201ENST00000306256 TMED8Q6PL24 325 aaPredicted RBP24.89■■□□□ 1.58
RER1-201ENST00000306256 USP17L2Q6R6M4 530 aa24.89■■□□□ 1.58
RER1-201ENST00000306256 TTC6Q86TZ1 520 aa24.89■■□□□ 1.58
RER1-201ENST00000306256 FEZ1Q99689 392 aa24.89■■□□□ 1.58
RER1-201ENST00000306256 PAK6Q9NQU5 681 aaPredicted RBP24.89■■□□□ 1.58
RER1-201ENST00000306256 RCAN3Q9UKA8 241 aa24.89■■□□□ 1.58
RER1-201ENST00000306256 TFRCP02786 760 aaKnown RBP24.88■■□□□ 1.57
RER1-201ENST00000306256 HMGCRP04035 888 aa24.88■■□□□ 1.57
RER1-201ENST00000306256 PLCD1P51178 756 aa24.88■■□□□ 1.57
RER1-201ENST00000306256 EVX2Q03828 476 aa24.88■■□□□ 1.57
RER1-201ENST00000306256 TRIM32Q13049 653 aa24.88■■□□□ 1.57
RER1-201ENST00000306256 RAB3GAP1Q15042 981 aa24.88■■□□□ 1.57
RER1-201ENST00000306256 HTATIP2Q9BUP3 242 aa24.88■■□□□ 1.57
RER1-201ENST00000306256 ZNF532Q9HCE3 1301 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 SHMT1P34896 483 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 ABCB5Q2M3G0 1257 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 CERKLQ49MI3 558 aaPredicted RBP24.87■■□□□ 1.57
RER1-201ENST00000306256 GPRC5AQ8NFJ5 357 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.87■■□□□ 1.57
RER1-201ENST00000306256 PAGR1Q9BTK6 254 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.87■■□□□ 1.573e-15■■□□□ 14.4
RER1-201ENST00000306256 PCDH10Q9P2E7 1040 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 RBPJLQ9UBG7 517 aa24.87■■□□□ 1.57
RER1-201ENST00000306256 POLR3DP05423 398 aaPredicted RBP24.86■■□□□ 1.57
RER1-201ENST00000306256 CYP2B6P20813 491 aa24.86■■□□□ 1.57
RER1-201ENST00000306256 POTEEQ6S8J3 1075 aa24.86■■□□□ 1.57
RER1-201ENST00000306256 ACER1Q8TDN7 264 aa24.86■■□□□ 1.57
RER1-201ENST00000306256 CRNKL1Q9BZJ0 848 aaKnown RBP24.86■■□□□ 1.57
RER1-201ENST00000306256 TCRBV5S4A2TA0A5A2 114 aa24.85■■□□□ 1.57
RER1-201ENST00000306256 RAB11FIP3O75154 756 aa24.85■■□□□ 1.57
RER1-201ENST00000306256 ERVK-9P63128 1117 aa24.85■■□□□ 1.57
RER1-201ENST00000306256 ERVK-24P63145 666 aa24.85■■□□□ 1.57
RER1-201ENST00000306256 Q3C1V9 767 aa24.85■■□□□ 1.57
RER1-201ENST00000306256 LCORLQ8N3X6 602 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms