RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 SPTLC2O15270 562 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 ANXA1P04083 346 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 SND1Q7KZF4 910 aaKnown RBP eCLIP15.75■□□□□ 0.11
HIPK3-201ENST00000303296 EEF1B2P24534 225 aaKnown RBP15.75■□□□□ 0.11
HIPK3-201ENST00000303296 ANGPTL8Q6UXH0 198 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 PPWD1Q96BP3 646 aaKnown RBP15.75■□□□□ 0.11
HIPK3-201ENST00000303296 GSTA4O15217 222 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 TROVE2P10155 538 aaKnown RBP eCLIP15.74■□□□□ 0.11
HIPK3-201ENST00000303296 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 FAM95CA0A1B0GW59 222 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 FOXO3O43524 673 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 IFNB1P01574 187 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 ARHGAP44Q17R89 818 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 NME8Q8N427 588 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 CABS1Q96KC9 395 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 AZI2Q9H6S1 392 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 PNMA2Q9UL42 364 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
HIPK3-201ENST00000303296 U2AF2P26368 475 aaKnown RBP eCLIP15.74■□□□□ 0.113e-13■■■□□ 18
HIPK3-201ENST00000303296 TRAPPC10P48553 1259 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 FAM186BQ8IYM0 893 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 CPXCR1Q8N123 301 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 TNNI1P19237 187 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 PTPROQ16827 1216 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 KAZNQ674X7 775 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 NEUROG2Q9H2A3 272 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 PYGLP06737 847 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 DNM2P50570 870 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 NUDT16Q96DE0 195 aaKnown RBP15.74■□□□□ 0.11
HIPK3-201ENST00000303296 TRIM55Q9BYV6 548 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 GANCQ8TET4 914 aa15.74■□□□□ 0.11
HIPK3-201ENST00000303296 HACE1Q8IYU2 909 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 MYCT1Q8N699 235 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 ZNF653Q96CK0 615 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 SLC13A4Q9UKG4 626 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 ATP6V0A1Q93050 837 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 NR1I2O75469 434 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 CFAP61Q8NHU2 1237 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 Q9H521 79 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 STX2P32856 288 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 HLA-DPA1P20036 260 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 KIF11P52732 1056 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 AFAP1Q8N556 730 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 RTL9Q8NET4 1388 aa15.73■□□□□ 0.11
HIPK3-201ENST00000303296 VGLL3A8MV65 326 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 TMED1Q13445 227 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 PAGR1Q9BTK6 254 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 CAVIN2O95810 425 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 ZNF277Q9NRM2 450 aaPredicted RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 PFDN6O15212 129 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 HELBQ8NG08 1087 aaPredicted RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 MRPL44Q9H9J2 332 aaKnown RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 CCDC85BQ15834 202 aaPredicted RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 EXOC7Q9UPT5 735 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 RASIP1Q5U651 963 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 C8orf37Q96NL8 207 aa15.72■□□□□ 0.11
HIPK3-201ENST00000303296 EIF2AQ9BY44 585 aaKnown RBP15.72■□□□□ 0.11
HIPK3-201ENST00000303296 MYCP01106 439 aaPredicted RBP15.71■□□□□ 0.11
HIPK3-201ENST00000303296 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 TRMT10CQ7L0Y3 403 aaKnown RBP15.71■□□□□ 0.11
HIPK3-201ENST00000303296 RIPOR2Q9Y4F9 1068 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 TRPA1O75762 1119 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 LDHBP07195 334 aaKnown RBP15.71■□□□□ 0.11
HIPK3-201ENST00000303296 VWA3BQ502W6 1294 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 NAPGQ99747 312 aaPredicted RBP15.71■□□□□ 0.11
HIPK3-201ENST00000303296 SUGT1Q9Y2Z0 365 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 PI4KAP2A4QPH2 592 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 PI4KAP1Q8N8J0 262 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 TYRO3Q06418 890 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
HIPK3-201ENST00000303296 RBM8AQ9Y5S9 174 aaKnown RBP15.71■□□□□ 0.11
HIPK3-201ENST00000303296 ATF7P17544 494 aaPredicted RBP15.71■□□□□ 0.1
HIPK3-201ENST00000303296 DAB2P98082 770 aa15.71■□□□□ 0.1
HIPK3-201ENST00000303296 CWF19L2Q2TBE0 894 aaKnown RBP15.71■□□□□ 0.1
HIPK3-201ENST00000303296 SSH1Q8WYL5 1049 aa15.71■□□□□ 0.1
HIPK3-201ENST00000303296 MOSPD1Q9UJG1 213 aa15.71■□□□□ 0.1
HIPK3-201ENST00000303296 WBP4O75554 376 aaKnown RBP15.71■□□□□ 0.1
HIPK3-201ENST00000303296 NLRP7Q8WX94 980 aa15.71■□□□□ 0.1
HIPK3-201ENST00000303296 RCN2Q14257 317 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 ZC3H12BQ5HYM0 836 aaKnown RBP15.7■□□□□ 0.1
HIPK3-201ENST00000303296 ADAT2Q7Z6V5 191 aaKnown RBP15.7■□□□□ 0.1
HIPK3-201ENST00000303296 MTRQ99707 1265 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 GUCY2FP51841 1108 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 TRIM4Q9C037 500 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 IPO11Q9UI26 975 aaKnown RBP15.7■□□□□ 0.1
HIPK3-201ENST00000303296 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.7■□□□□ 0.1
HIPK3-201ENST00000303296 H3BRJ5 948 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 KRT10P13645 584 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 TXKP42681 527 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 TRIM59Q8IWR1 403 aa15.7■□□□□ 0.1
HIPK3-201ENST00000303296 STAG1Q8WVM7 1258 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms