RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 ARMT1Q9H993 441 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 ZBTB21Q9ULJ3 1066 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 KIAA0100Q14667 2235 aaKnown RBP13.64□□□□□ -0.23
CLCC1-201ENST00000302500 MBD4O95243 580 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 LACTBP83111 547 aaPredicted RBP13.64□□□□□ -0.23
CLCC1-201ENST00000302500 OTUD7BQ6GQQ9 843 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 FBXO46Q6PJ61 603 aaPredicted RBP13.64□□□□□ -0.23
CLCC1-201ENST00000302500 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
CLCC1-201ENST00000302500 ZNF280CQ8ND82 737 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 TBC1D2Q9BYX2 928 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 GINM1Q9NU53 330 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 ASNSP08243 561 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 CYP2C8P10632 490 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 CYP2D6P10635 497 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 SPP2Q13103 211 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 SLC4A8Q2Y0W8 1093 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 STRBPQ96SI9 672 aaKnown RBP13.63□□□□□ -0.23
CLCC1-201ENST00000302500 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
CLCC1-201ENST00000302500 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
CLCC1-201ENST00000302500 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
CLCC1-201ENST00000302500 TRIM75PA6NK02 468 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 GSG1L2A8MUP6 293 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 GDF11O95390 407 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 MX1P20591 662 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 BACE1P56817 501 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 C12orf60Q5U649 245 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 C12orf42Q96LP6 360 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 CRNKL1Q9BZJ0 848 aaKnown RBP13.62□□□□□ -0.23
CLCC1-201ENST00000302500 ATP8A2Q9NTI2 1148 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 TAOK2Q9UL54 1235 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
CLCC1-201ENST00000302500 SUPT16HQ9Y5B9 1047 aaKnown RBP13.62□□□□□ -0.23
CLCC1-201ENST00000302500 CYP2D7A0A087X1C5 515 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 M0R2C6 588 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 HOXA7P31268 230 aaPredicted RBP13.61□□□□□ -0.23
CLCC1-201ENST00000302500 USP5P45974 858 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 PDE1AP54750 535 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
CLCC1-201ENST00000302500 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 APPBP2Q92624 585 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 ARMC5Q96C12 935 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLCC1-201ENST00000302500 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 CPA4Q9UI42 421 aa13.61□□□□□ -0.23
CLCC1-201ENST00000302500 RNF113AO15541 343 aaKnown RBP13.6□□□□□ -0.23
CLCC1-201ENST00000302500 CAPN15O75808 1086 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 GLRX3O76003 335 aaKnown RBP13.6□□□□□ -0.23
CLCC1-201ENST00000302500 GH2P01242 217 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 HMGCS2P54868 508 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 ZMYM1Q5SVZ6 1142 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 CTR9Q6PD62 1173 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 TTC6Q86TZ1 520 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 SEC62Q99442 399 aaKnown RBP13.6□□□□□ -0.23
CLCC1-201ENST00000302500 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.234e-7■■■■□ 23.1
CLCC1-201ENST00000302500 OSBPL3Q9H4L5 887 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 TRIM17Q9Y577 477 aa13.6□□□□□ -0.23
CLCC1-201ENST00000302500 PDE4DIPQ5VU43 2346 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 NUCB1Q02818 461 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 MTMR2Q13614 643 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 SBK1Q52WX2 424 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 KIAA1755Q5JYT7 1200 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 C16orf86Q6ZW13 317 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 DYNLL2Q96FJ2 89 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
CLCC1-201ENST00000302500 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 USP17L12C9JPN9 530 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 USP17L21D6R901 530 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 GPAA1O43292 621 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.24
CLCC1-201ENST00000302500 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 ASCC2Q9H1I8 757 aaPredicted RBP13.58□□□□□ -0.24
CLCC1-201ENST00000302500 EFCC1Q9HA90 598 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 MORF4L1Q9UBU8 362 aa13.58□□□□□ -0.24
CLCC1-201ENST00000302500 C19orf81C9J6K1 198 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 ZFYP08048 801 aaPredicted RBP13.57□□□□□ -0.24
CLCC1-201ENST00000302500 CERKLQ49MI3 558 aaPredicted RBP13.57□□□□□ -0.24
CLCC1-201ENST00000302500 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 GADL1Q6ZQY3 521 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 CRACR2BQ8N4Y2 399 aaPredicted RBP13.57□□□□□ -0.24
CLCC1-201ENST00000302500 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 TXNRD2Q9NNW7 524 aa13.57□□□□□ -0.24
CLCC1-201ENST00000302500 TACC3Q9Y6A5 838 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms