RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 KRT12Q99456 494 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 ANGPTL2Q9UKU9 493 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 PACSIN2Q9UNF0 486 aaPredicted RBP13.75□□□□□ -0.21
SNRK-201ENST00000296088 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
SNRK-201ENST00000296088 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
SNRK-201ENST00000296088 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 LRRC8CQ8TDW0 803 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 PAWRQ96IZ0 340 aaKnown RBP13.75□□□□□ -0.21
SNRK-201ENST00000296088 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
SNRK-201ENST00000296088 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 JADE1Q6IE81 842 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 LMNAP02545 664 aaKnown RBP13.75□□□□□ -0.21
SNRK-201ENST00000296088 SERPINB6P35237 376 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 RNF34Q969K3 372 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 IWS1Q96ST2 819 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
SNRK-201ENST00000296088 CREB3O43889 395 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 MAN1A2O60476 641 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
SNRK-201ENST00000296088 ATP6V1E1P36543 226 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 RSBN1LQ6PCB5 846 aaPredicted RBP13.74□□□□□ -0.21
SNRK-201ENST00000296088 GFM2Q969S9 779 aaKnown RBP13.74□□□□□ -0.21
SNRK-201ENST00000296088 VPS16Q9H269 839 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 FGFR1OP2Q9NVK5 253 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 ARHGEF9O43307 516 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 CLTAP09496 248 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
SNRK-201ENST00000296088 DPH6Q7L8W6 267 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 CCDC138Q96M89 665 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
SNRK-201ENST00000296088 CNOT10Q9H9A5 744 aaKnown RBP13.74□□□□□ -0.21
SNRK-201ENST00000296088 LONRF2Q1L5Z9 754 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 CDKL2Q92772 493 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 TRIM31Q9BZY9 425 aa13.74□□□□□ -0.21
SNRK-201ENST00000296088 CDR2Q01850 454 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 NMIQ13287 307 aaPredicted RBP13.73□□□□□ -0.21
SNRK-201ENST00000296088 ST13P4Q8IZP2 240 aaPredicted RBP13.73□□□□□ -0.21
SNRK-201ENST00000296088 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 SPDL1Q96EA4 605 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 MYO1AQ9UBC5 1043 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 LIG3P49916 1009 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 STRN3Q13033 797 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 ANKLE2Q86XL3 938 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 PTCD1O75127 700 aaKnown RBP13.73□□□□□ -0.21
SNRK-201ENST00000296088 SEPT2Q15019 361 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 TRMT1LQ7Z2T5 733 aaKnown RBP13.73□□□□□ -0.21
SNRK-201ENST00000296088 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 SYNJ2O15056 1496 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 EIF3DO15371 548 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNRK-201ENST00000296088 SEC24BO95487 1268 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 P4HA1P13674 534 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 ZNF449Q6P9G9 518 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 IFNL2Q8IZJ0 200 aa13.73□□□□□ -0.21
SNRK-201ENST00000296088 ZNF277Q9NRM2 450 aaPredicted RBP13.73□□□□□ -0.21
SNRK-201ENST00000296088 GPC4O75487 556 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 PDXDC1Q6P996 788 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 CTAGE3PQ8IX95 158 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 CBX8Q9HC52 389 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 ZFXP17010 805 aaPredicted RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 STX1BP61266 288 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 OR8K1Q8NGG5 319 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 RSAD2Q8WXG1 361 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 MAP3K7O43318 606 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 EEF1DP29692 281 aaKnown RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 SLC9C2Q5TAH2 1124 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 FNBP4Q8N3X1 1017 aaPredicted RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 PI4KAP2A4QPH2 592 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 ST5P78524 1137 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 HADHQ16836 314 aaKnown RBP13.72□□□□□ -0.21
SNRK-201ENST00000296088 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
SNRK-201ENST00000296088 ARHGAP18Q8N392 663 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms