RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 KCNH3Q9ULD8 1083 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 MINPP1Q9UNW1 487 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 CACNA1SQ13698 1873 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 IKBKBO14920 756 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 METTL16Q86W50 562 aaKnown RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 KRI1Q8N9T8 703 aaKnown RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 FANCBQ8NB91 859 aa17.35■□□□□ 0.37
CCDC116-201ENST00000292779 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 GNL3LQ9NVN8 582 aaKnown RBP17.35■□□□□ 0.37
CCDC116-201ENST00000292779 COL24A1Q17RW2 1714 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 DEXIO95424 95 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
CCDC116-201ENST00000292779 SPECC1Q5M775 1068 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 KRBA2Q6ZNG9 492 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 TMC6Q7Z403 805 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 HSD3B7Q9H2F3 369 aa17.34■□□□□ 0.37
CCDC116-201ENST00000292779 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
CCDC116-201ENST00000292779 ZPR1O75312 459 aa17.33■□□□□ 0.37
CCDC116-201ENST00000292779 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.37
CCDC116-201ENST00000292779 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.37
CCDC116-201ENST00000292779 CEP135Q66GS9 1140 aa17.33■□□□□ 0.37
CCDC116-201ENST00000292779 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.37
CCDC116-201ENST00000292779 ANAPC4Q9UJX5 808 aa17.33■□□□□ 0.37
CCDC116-201ENST00000292779 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.37
CCDC116-201ENST00000292779 RFC4P35249 363 aa17.33■□□□□ 0.36
CCDC116-201ENST00000292779 RCAN1P53805 252 aa17.33■□□□□ 0.36
CCDC116-201ENST00000292779 NR5A1Q13285 461 aa17.33■□□□□ 0.36
CCDC116-201ENST00000292779 SEC23AQ15436 765 aa17.33■□□□□ 0.36
CCDC116-201ENST00000292779 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
CCDC116-201ENST00000292779 CNNM3Q8NE01 707 aa17.33■□□□□ 0.36
CCDC116-201ENST00000292779 FAM84BQ96KN1 310 aaPredicted RBP17.33■□□□□ 0.36
CCDC116-201ENST00000292779 RIOK1Q9BRS2 568 aaKnown RBP17.33■□□□□ 0.36
CCDC116-201ENST00000292779 TNKSO95271 1327 aa17.33■□□□□ 0.36
CCDC116-201ENST00000292779 ATP1A3P13637 1013 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 FANCCQ00597 558 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 GRIN1Q05586 938 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 FOXP4Q8IVH2 680 aaPredicted RBP17.32■□□□□ 0.36
CCDC116-201ENST00000292779 ZNF592Q92610 1267 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 ESR2Q92731 530 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 AKT1S1Q96B36 256 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 TRMT1Q9NXH9 659 aaKnown RBP17.32■□□□□ 0.36
CCDC116-201ENST00000292779 PRKCSHP14314 528 aaPredicted RBP17.32■□□□□ 0.36
CCDC116-201ENST00000292779 DYNLL1P63167 89 aaKnown RBP17.32■□□□□ 0.36
CCDC116-201ENST00000292779 RILPL1Q5EBL4 403 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 ARMCX5Q6P1M9 558 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 NYAP1Q6ZVC0 841 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 CCAR2Q8N163 923 aaKnown RBP17.32■□□□□ 0.36
CCDC116-201ENST00000292779 OXER1Q8TDS5 423 aa17.32■□□□□ 0.36
CCDC116-201ENST00000292779 FBXO2Q9UK22 296 aaPredicted RBP17.32■□□□□ 0.36
CCDC116-201ENST00000292779 CYP2D7A0A087X1C5 515 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 FOXN1O15353 648 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 PTPN14Q15678 1187 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 PCDHB6Q9Y5E3 794 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 PCDHA5Q9Y5H7 936 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 GYS1P13807 737 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 PTPREP23469 700 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 KLRK1P26718 216 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 MYL5Q02045 173 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 NFIXQ14938 502 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 DEFB132Q7Z7B7 95 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 CCDC150Q8NCX0 1101 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 CCDC112Q8NEF3 446 aa17.31■□□□□ 0.36
CCDC116-201ENST00000292779 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 MDM2Q00987 491 aaPredicted RBP17.3■□□□□ 0.36
CCDC116-201ENST00000292779 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 ENAHQ8N8S7 591 aaPredicted RBP17.3■□□□□ 0.36
CCDC116-201ENST00000292779 ANKRD7Q92527 254 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 CAMKK2Q96RR4 588 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 KCND1Q9NSA2 647 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
CCDC116-201ENST00000292779 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 SLC51AQ86UW1 340 aa17.3■□□□□ 0.36
CCDC116-201ENST00000292779 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
CCDC116-201ENST00000292779 ZSCAN10Q96SZ4 725 aaPredicted RBP17.3■□□□□ 0.36
CCDC116-201ENST00000292779 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
CCDC116-201ENST00000292779 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
CCDC116-201ENST00000292779 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
CCDC116-201ENST00000292779 BMP6P22004 513 aa17.29■□□□□ 0.36
CCDC116-201ENST00000292779 SFPQP23246 707 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC116-201ENST00000292779 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
CCDC116-201ENST00000292779 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
CCDC116-201ENST00000292779 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
CCDC116-201ENST00000292779 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
CCDC116-201ENST00000292779 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
CCDC116-201ENST00000292779 DPF2Q92785 391 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 CABP5Q9NP86 173 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
CCDC116-201ENST00000292779 PRDM1O75626 825 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 UBASH3AP57075 661 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 PDE4BQ07343 736 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 FBXO33Q7Z6M2 555 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
CCDC116-201ENST00000292779 NLRP3Q96P20 1036 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms