RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ZHX2Q9Y6X8 837 aa11.88□□□□□ -0.51
CCDC58-201ENST00000291458 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
CCDC58-201ENST00000291458 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-201ENST00000291458 PHF20L1A8MW92 1017 aa11.87□□□□□ -0.51
CCDC58-201ENST00000291458 GDF11O95390 407 aa11.87□□□□□ -0.51
CCDC58-201ENST00000291458 PDE6AP16499 860 aa11.87□□□□□ -0.51
CCDC58-201ENST00000291458 PPATQ06203 517 aa11.87□□□□□ -0.51
CCDC58-201ENST00000291458 SHROOM1Q2M3G4 852 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-201ENST00000291458 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-201ENST00000291458 ZFYVE28Q9HCC9 887 aa11.87□□□□□ -0.51
CCDC58-201ENST00000291458 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
CCDC58-201ENST00000291458 COL2A1P02458 1487 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-201ENST00000291458 BAZ2AQ9UIF9 1905 aaKnown RBP11.86□□□□□ -0.51
CCDC58-201ENST00000291458 PTPRAP18433 802 aa11.86□□□□□ -0.51
CCDC58-201ENST00000291458 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
CCDC58-201ENST00000291458 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
CCDC58-201ENST00000291458 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
CCDC58-201ENST00000291458 MYH8P13535 1937 aa11.86□□□□□ -0.51
CCDC58-201ENST00000291458 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
CCDC58-201ENST00000291458 MAGEB6P1A0A0J9YX57 407 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 PDHXO00330 501 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 CHGBP05060 677 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 HLA-DOAP06340 250 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 CAP1Q01518 475 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 SP3Q02447 781 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
CCDC58-201ENST00000291458 TTF1Q15361 905 aaPredicted RBP11.85□□□□□ -0.51
CCDC58-201ENST00000291458 SLC9C2Q5TAH2 1124 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 OTOP1Q7RTM1 612 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 ERO1AQ96HE7 468 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 CFHR5Q9BXR6 569 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 CPA4Q9UI42 421 aa11.85□□□□□ -0.51
CCDC58-201ENST00000291458 LOC285556D6RIA3 1793 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 CTNND1O60716 968 aaKnown RBP11.84□□□□□ -0.51
CCDC58-201ENST00000291458 MAP4K4O95819 1239 aaPredicted RBP11.84□□□□□ -0.51
CCDC58-201ENST00000291458 CYP2C8P10632 490 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 PPP4CP60510 307 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 LCORLQ8N3X6 602 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 ARHGAP39Q9C0H5 1083 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 DNAJC18Q9H819 358 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
CCDC58-201ENST00000291458 MBD4O95243 580 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
CCDC58-201ENST00000291458 FBXO46Q6PJ61 603 aaPredicted RBP11.83□□□□□ -0.52
CCDC58-201ENST00000291458 ANKRD23Q86SG2 305 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
CCDC58-201ENST00000291458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC58-201ENST00000291458 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
CCDC58-201ENST00000291458 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 PI4KBQ9UBF8 816 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 MGAMO43451 1857 aa11.83□□□□□ -0.52
CCDC58-201ENST00000291458 A0A0G2JLL6 359 aaPredicted RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 CYP2D6P10635 497 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 ATP5JP18859 108 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 PDE4AP27815 886 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 CAP2P40123 477 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 HMGCS2P54868 508 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 SPP2Q13103 211 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 MOGSQ13724 837 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 PRRT2Q7Z6L0 340 aaPredicted RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 TMC2Q8TDI7 906 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 HAUS7Q99871 368 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 RIOK1Q9BRS2 568 aaKnown RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 ECHDC1Q9NTX5 307 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 HERC5Q9UII4 1024 aaKnown RBP11.82□□□□□ -0.52
CCDC58-201ENST00000291458 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
CCDC58-201ENST00000291458 TCRBV5S4A2TA0A5A2 114 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 CXCL11O14625 94 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 PRKAB2O43741 272 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 TBC1D12O60347 775 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 TLR2O60603 784 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 ADD2P35612 726 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 JAG1P78504 1218 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 MTMR2Q13614 643 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 KIF22Q14807 665 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
CCDC58-201ENST00000291458 PKN2Q16513 984 aaKnown RBP11.81□□□□□ -0.52
CCDC58-201ENST00000291458 TREML2Q5T2D2 321 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
CCDC58-201ENST00000291458 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC58-201ENST00000291458 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
CCDC58-201ENST00000291458 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 GH2P01242 217 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 IRX6P78412 446 aaPredicted RBP11.8□□□□□ -0.52
CCDC58-201ENST00000291458 MAP3K10Q02779 954 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 FASTKD5Q7L8L6 764 aaKnown RBP11.8□□□□□ -0.52
CCDC58-201ENST00000291458 ZNF280CQ8ND82 737 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms