RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 DDAH1O94760 285 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 TGFB2P61812 414 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 TFAP4Q01664 338 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 SSRP1Q08945 709 aaKnown RBP25.7■■□□□ 1.7
CCDC7-201ENST00000277657 TTC6Q86TZ1 520 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 NUP133Q8WUM0 1156 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 ZDHHC15Q96MV8 337 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 ZNF287Q9HBT7 754 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 FSD2A1L4K1 749 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 CALM1P0DP23 149 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 CALM2P0DP24 149 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 CALM3P0DP25 149 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 CRKP46108 304 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 RCSD1Q6JBY9 416 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 NBPF11Q86T75 865 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 ANKS1AQ92625 1134 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 ALG1Q9BT22 464 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 TCP11L1Q9NUJ3 509 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 PSME4Q14997 1843 aa25.69■■□□□ 1.7
CCDC7-201ENST00000277657 GOLGB1Q14789 3259 aaKnown RBP25.68■■□□□ 1.7
CCDC7-201ENST00000277657 OTUD7BQ6GQQ9 843 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 CRACR2BQ8N4Y2 399 aaPredicted RBP25.68■■□□□ 1.7
CCDC7-201ENST00000277657 SLC44A5Q8NCS7 719 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 USP40Q9NVE5 1235 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 RASA1P20936 1047 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 ATL3Q6DD88 541 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 CDC42EP5Q6NZY7 148 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 DGKHQ86XP1 1220 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 AIFM3Q96NN9 605 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 SLC26A6Q9BXS9 759 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 IL17RBQ9NRM6 502 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 TMEM63CQ9P1W3 806 aa25.68■■□□□ 1.7
CCDC7-201ENST00000277657 TFIP11Q9UBB9 837 aaKnown RBP25.68■■□□□ 1.7
CCDC7-201ENST00000277657 YDJCA8MPS7 323 aa25.67■■□□□ 1.7
CCDC7-201ENST00000277657 CDK8P49336 464 aa25.67■■□□□ 1.7
CCDC7-201ENST00000277657 CCDC178Q5BJE1 867 aa25.67■■□□□ 1.7
CCDC7-201ENST00000277657 KIAA0825Q8IV33 1275 aa25.67■■□□□ 1.7
CCDC7-201ENST00000277657 ZNF444Q8N0Y2 327 aaPredicted RBP25.67■■□□□ 1.7
CCDC7-201ENST00000277657 DDX4Q9NQI0 724 aaKnown RBP25.67■■□□□ 1.7
CCDC7-201ENST00000277657 GJB4Q9NTQ9 266 aa25.67■■□□□ 1.7
CCDC7-201ENST00000277657 RBM27Q9P2N5 1060 aaKnown RBP25.67■■□□□ 1.7
CCDC7-201ENST00000277657 POLD1P28340 1107 aa25.66■■□□□ 1.7
CCDC7-201ENST00000277657 ZSCAN23Q3MJ62 389 aa25.66■■□□□ 1.7
CCDC7-201ENST00000277657 LEO1Q8WVC0 666 aaPredicted RBP25.66■■□□□ 1.7
CCDC7-201ENST00000277657 WASF1Q92558 559 aa25.66■■□□□ 1.7
CCDC7-201ENST00000277657 RBM28Q9NW13 759 aaKnown RBP25.66■■□□□ 1.7
CCDC7-201ENST00000277657 CFAP45Q9UL16 551 aa25.66■■□□□ 1.7
CCDC7-201ENST00000277657 ATF5Q9Y2D1 282 aaPredicted RBP25.66■■□□□ 1.7
CCDC7-201ENST00000277657 TRIM22Q8IYM9 498 aa25.66■■□□□ 1.7
CCDC7-201ENST00000277657 ISY1Q9ULR0 285 aaKnown RBP25.66■■□□□ 1.7
CCDC7-201ENST00000277657 ZNF445P59923 1031 aa25.65■■□□□ 1.7
CCDC7-201ENST00000277657 FUT2Q10981 343 aa25.65■■□□□ 1.7
CCDC7-201ENST00000277657 SOGA3Q5TF21 947 aa25.65■■□□□ 1.7
CCDC7-201ENST00000277657 SPATA32Q96LK8 384 aa25.65■■□□□ 1.7
CCDC7-201ENST00000277657 VPS33BQ9H267 617 aa25.65■■□□□ 1.7
CCDC7-201ENST00000277657 TSPY3P0CV98 308 aa25.64■■□□□ 1.7
CCDC7-201ENST00000277657 TSPY8P0CW00 308 aa25.64■■□□□ 1.7
CCDC7-201ENST00000277657 PICALMQ13492 652 aa25.64■■□□□ 1.7
CCDC7-201ENST00000277657 KRT40Q6A162 431 aa25.64■■□□□ 1.7
CCDC7-201ENST00000277657 PIM2Q9P1W9 311 aa25.64■■□□□ 1.7
CCDC7-201ENST00000277657 SERPINA10Q9UK55 444 aa25.64■■□□□ 1.7
CCDC7-201ENST00000277657 KIF23Q02241 960 aaPredicted RBP25.64■■□□□ 1.69
CCDC7-201ENST00000277657 GABPAQ06546 454 aa25.64■■□□□ 1.69
CCDC7-201ENST00000277657 BRAPQ7Z569 592 aa25.64■■□□□ 1.69
CCDC7-201ENST00000277657 RNF26Q9BY78 433 aaPredicted RBP25.64■■□□□ 1.69
CCDC7-201ENST00000277657 GOLGA6L3A6NEY3 463 aa25.63■■□□□ 1.69
CCDC7-201ENST00000277657 UBE2Q2LH0YL09 131 aa25.63■■□□□ 1.69
CCDC7-201ENST00000277657 DEXIO95424 95 aa25.63■■□□□ 1.69
CCDC7-201ENST00000277657 ZNF396Q96N95 335 aaPredicted RBP25.63■■□□□ 1.69
CCDC7-201ENST00000277657 OSBPL5Q9H0X9 879 aaPredicted RBP25.63■■□□□ 1.69
CCDC7-201ENST00000277657 BRCA1P38398 1863 aaKnown RBP25.63■■□□□ 1.69
CCDC7-201ENST00000277657 GUCY1A2P33402 732 aa25.62■■□□□ 1.69
CCDC7-201ENST00000277657 CMTR1Q8N1G2 835 aaKnown RBP25.62■■□□□ 1.69
CCDC7-201ENST00000277657 SYAP1Q96A49 352 aaPredicted RBP25.62■■□□□ 1.69
CCDC7-201ENST00000277657 COL4A5P29400 1685 aa25.62■■□□□ 1.69
CCDC7-201ENST00000277657 TMTC3Q6ZXV5 915 aa25.62■■□□□ 1.69
CCDC7-201ENST00000277657 NEDD1Q8NHV4 660 aa25.62■■□□□ 1.69
CCDC7-201ENST00000277657 MAP3K14Q99558 947 aa25.62■■□□□ 1.69
CCDC7-201ENST00000277657 KIF28PB7ZC32 967 aa25.61■■□□□ 1.69
CCDC7-201ENST00000277657 R3HDM1Q15032 1099 aaKnown RBP25.61■■□□□ 1.69
CCDC7-201ENST00000277657 CCDC82Q8N4S0 544 aa25.61■■□□□ 1.69
CCDC7-201ENST00000277657 KAT14Q9H8E8 782 aa25.61■■□□□ 1.69
CCDC7-201ENST00000277657 ZNF277Q9NRM2 450 aaPredicted RBP25.61■■□□□ 1.69
CCDC7-201ENST00000277657 RCOR1Q9UKL0 485 aa25.61■■□□□ 1.69
CCDC7-201ENST00000277657 MYH6P13533 1939 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 TRIM29Q14134 588 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 GAS2L3Q86XJ1 694 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 CTCFLQ8NI51 663 aaPredicted RBP25.6■■□□□ 1.69
CCDC7-201ENST00000277657 USP28Q96RU2 1077 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 SGIP1Q9BQI5 828 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 PCDHAC2Q9Y5I4 1007 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 PRPF3O43395 683 aaKnown RBP25.6■■□□□ 1.69
CCDC7-201ENST00000277657 PLEKHA8P1O95397 391 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 NFIAQ12857 509 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 LARGE2Q8N3Y3 721 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 IDI2Q9BXS1 227 aa25.6■■□□□ 1.69
CCDC7-201ENST00000277657 MYO3BQ8WXR4 1341 aa25.59■■□□□ 1.69
CCDC7-201ENST00000277657 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
CCDC7-201ENST00000277657 PNMA1Q8ND90 353 aa25.59■■□□□ 1.69
CCDC7-201ENST00000277657 PLIN4Q96Q06 1357 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms