RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 ZNF34Q8IZ26 560 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 TRIML1Q8N9V2 468 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 FAM89AQ96GI7 184 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 ALG1Q9BT22 464 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 TRMT112Q9UI30 125 aaKnown RBP11.62□□□□□ -0.55
CPNE9-201ENST00000273027 HPSEQ9Y251 543 aa11.62□□□□□ -0.55
CPNE9-201ENST00000273027 ERICH2A1L162 156 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 CCDC69A6NI79 296 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 BMP15O95972 392 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 SRGNP10124 158 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 SKILP12757 684 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 IFNAR1P17181 557 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 XBP1P17861 261 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 ADORA1P30542 326 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 FAM193AP78312 1265 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 SSRP1Q08945 709 aaKnown RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 TTLL5Q6EMB2 1281 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 PNMA8AQ86V59 439 aaPredicted RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 TRIM22Q8IYM9 498 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 CNBD1Q8NA66 436 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 KIF18AQ8NI77 898 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 IGDCC4Q8TDY8 1250 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 STRBPQ96SI9 672 aaKnown RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 FOXP1Q9H334 677 aaPredicted RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 ZNF277Q9NRM2 450 aaPredicted RBP11.61□□□□□ -0.55
CPNE9-201ENST00000273027 CACNA1SQ13698 1873 aa11.61□□□□□ -0.55
CPNE9-201ENST00000273027 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
CPNE9-201ENST00000273027 PDE4DIPQ5VU43 2346 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 TCRBV5S4A2TA0A5A2 114 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 FMNL1O95466 1100 aaPredicted RBP11.6□□□□□ -0.55
CPNE9-201ENST00000273027 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
CPNE9-201ENST00000273027 PDE6AP16499 860 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 SYKP43405 635 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 NDUFA8P51970 172 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 CAPNS2Q96L46 248 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 GPR101Q96P66 508 aaPredicted RBP11.6□□□□□ -0.55
CPNE9-201ENST00000273027 PYM1Q9BRP8 204 aaKnown RBP11.6□□□□□ -0.55
CPNE9-201ENST00000273027 NAPBQ9H115 298 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 GREM2Q9H772 168 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 CLIC4Q9Y696 253 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 ECM29Q5VYK3 1845 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
CPNE9-201ENST00000273027 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 GOLGA6L9A6NEM1 432 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 GOLGA8AA7E2F4 631 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 DEXIO95424 95 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 APPP05067 770 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 ST5P78524 1137 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 SCARF1Q14162 830 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 CCDC152Q4G0S7 254 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 KRT40Q6A162 431 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 NFXL1Q6ZNB6 911 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 MFSD6Q6ZSS7 791 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 VPS37DQ86XT2 251 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 DZIP3Q86Y13 1208 aaKnown RBP11.59□□□□□ -0.55
CPNE9-201ENST00000273027 IFNL3Q8IZI9 196 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 SRRTQ9BXP5 876 aaKnown RBP11.59□□□□□ -0.55
CPNE9-201ENST00000273027 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 SLC12A7Q9Y666 1083 aa11.59□□□□□ -0.55
CPNE9-201ENST00000273027 SCN4AP35499 1836 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 IDH1O75874 414 aaKnown RBP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CHGBP05060 677 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CALM1P0DP23 149 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CALM2P0DP24 149 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CALM3P0DP25 149 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 PFKFB1P16118 471 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 SFPQP23246 707 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 GTF2E1P29083 439 aaPredicted RBP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 HAND2P61296 217 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CCZ1BP86790 482 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 CCZ1P86791 482 aaPredicted RBP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 MYL5Q02045 173 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 FMR1Q06787 632 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPNE9-201ENST00000273027 PTPAQ15257 358 aa11.58□□□□□ -0.56
CPNE9-201ENST00000273027 NTRK3Q16288 839 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms