RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
SCAF11-201ENST00000266589 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.25
SCAF11-201ENST00000266589 UBE2HP62256 183 aa13.46□□□□□ -0.25
SCAF11-201ENST00000266589 AIFM3Q96NN9 605 aa13.46□□□□□ -0.25
SCAF11-201ENST00000266589 PSMD1Q99460 953 aa13.46□□□□□ -0.25
SCAF11-201ENST00000266589 ZNF287Q9HBT7 754 aa13.46□□□□□ -0.25
SCAF11-201ENST00000266589 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
SCAF11-201ENST00000266589 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
SCAF11-201ENST00000266589 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
SCAF11-201ENST00000266589 YDJCA8MPS7 323 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 WDHD1O75717 1129 aaPredicted RBP13.46□□□□□ -0.26
SCAF11-201ENST00000266589 DDAH1O94760 285 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 CALM1P0DP23 149 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 CALM2P0DP24 149 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 CALM3P0DP25 149 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 TGFB2P61812 414 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.26
SCAF11-201ENST00000266589 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 C16orf86Q6ZW13 317 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 TTC6Q86TZ1 520 aa13.46□□□□□ -0.26
SCAF11-201ENST00000266589 ZNF444Q8N0Y2 327 aaPredicted RBP13.46□□□□□ -0.26
SCAF11-201ENST00000266589 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.26
SCAF11-201ENST00000266589 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.26
SCAF11-201ENST00000266589 MYH6P13533 1939 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 RASA1P20936 1047 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 CDK8P49336 464 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 TROAPQ12815 778 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 R3HDM1Q15032 1099 aaKnown RBP13.45□□□□□ -0.26
SCAF11-201ENST00000266589 PPP2R5BQ15173 497 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
SCAF11-201ENST00000266589 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 IL17RBQ9NRM6 502 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
SCAF11-201ENST00000266589 MYH8P13535 1937 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 ELP1O95163 1332 aa13.45□□□□□ -0.26
SCAF11-201ENST00000266589 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
SCAF11-201ENST00000266589 RCSD1Q6JBY9 416 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 NBPF11Q86T75 865 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 RBM5P52756 815 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCAF11-201ENST00000266589 ZSCAN23Q3MJ62 389 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 KRT40Q6A162 431 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 CRACR2BQ8N4Y2 399 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-201ENST00000266589 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-201ENST00000266589 WASF1Q92558 559 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-201ENST00000266589 RBM28Q9NW13 759 aaKnown RBP13.44□□□□□ -0.26
SCAF11-201ENST00000266589 CFAP45Q9UL16 551 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 PCDHAC2Q9Y5I4 1007 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 COL4A5P29400 1685 aa13.44□□□□□ -0.26
SCAF11-201ENST00000266589 TRIM29Q14134 588 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 LARGE2Q8N3Y3 721 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-201ENST00000266589 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 TCP11L1Q9NUJ3 509 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 DEXIO95424 95 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-201ENST00000266589 CTCFLQ8NI51 663 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-201ENST00000266589 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-201ENST00000266589 PPP1R1BQ9UD71 204 aaPredicted RBP13.43□□□□□ -0.26
SCAF11-201ENST00000266589 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
SCAF11-201ENST00000266589 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
SCAF11-201ENST00000266589 PLEKHA8P1O95397 391 aa13.42□□□□□ -0.26
SCAF11-201ENST00000266589 NFIAQ12857 509 aa13.42□□□□□ -0.26
SCAF11-201ENST00000266589 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
SCAF11-201ENST00000266589 ANKS1AQ92625 1134 aa13.42□□□□□ -0.26
SCAF11-201ENST00000266589 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-201ENST00000266589 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-201ENST00000266589 FSD2A1L4K1 749 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
SCAF11-201ENST00000266589 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
SCAF11-201ENST00000266589 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 TMTC3Q6ZXV5 915 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 PNMA1Q8ND90 353 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 USP28Q96RU2 1077 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCAF11-201ENST00000266589 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 RAD17O75943 681 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 CACNB3P54284 484 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 ZNF445P59923 1031 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
SCAF11-201ENST00000266589 GABPAQ06546 454 aa13.41□□□□□ -0.26
SCAF11-201ENST00000266589 FUT2Q10981 343 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms