RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 RIMBP2O15034 1052 aa19.52■□□□□ 0.72
CHKA-201ENST00000265689 ORC4O43929 436 aa19.52■□□□□ 0.72
CHKA-201ENST00000265689 DEXIO95424 95 aa19.52■□□□□ 0.72
CHKA-201ENST00000265689 MMP1P03956 469 aa19.52■□□□□ 0.72
CHKA-201ENST00000265689 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.72
CHKA-201ENST00000265689 ZNF622Q969S3 477 aaKnown RBP eCLIP19.52■□□□□ 0.72
CHKA-201ENST00000265689 MAP3K14Q99558 947 aa19.52■□□□□ 0.72
CHKA-201ENST00000265689 ARPP21Q9UBL0 812 aaPredicted RBP19.52■□□□□ 0.72
CHKA-201ENST00000265689 SRGNP10124 158 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 ATP2B4P23634 1241 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 ZNF165P49910 485 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 SBK1Q52WX2 424 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 CATIPQ7Z7H3 387 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 CD209Q9NNX6 404 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 STK32BQ9NY57 414 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 GGA1Q9UJY5 639 aa19.52■□□□□ 0.71
CHKA-201ENST00000265689 SF3B2Q13435 895 aaKnown RBP19.51■□□□□ 0.71
CHKA-201ENST00000265689 PTPAQ15257 358 aa19.51■□□□□ 0.71
CHKA-201ENST00000265689 TMED8Q6PL24 325 aaPredicted RBP19.51■□□□□ 0.71
CHKA-201ENST00000265689 DIS3L2Q8IYB7 885 aaKnown RBP19.51■□□□□ 0.71
CHKA-201ENST00000265689 NAP1L5Q96NT1 182 aaPredicted RBP19.51■□□□□ 0.71
CHKA-201ENST00000265689 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
CHKA-201ENST00000265689 hCG_1642624A0A1W2PR95 340 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 PLEKHA8P1O95397 391 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 USP5P45974 858 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 C11orf57Q6ZUT1 292 aaPredicted RBP19.5■□□□□ 0.71
CHKA-201ENST00000265689 SDF4Q9BRK5 362 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 MKRN1Q9UHC7 482 aaKnown RBP19.5■□□□□ 0.71
CHKA-201ENST00000265689 MROH7-TTC4A0A0A0MT08 1334 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 BBOX1O75936 387 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 SLC3A2P08195 630 aaKnown RBP19.5■□□□□ 0.71
CHKA-201ENST00000265689 TROAPQ12815 778 aa19.5■□□□□ 0.71
CHKA-201ENST00000265689 SAFBQ15424 915 aaKnown RBP eCLIP19.5■□□□□ 0.71
CHKA-201ENST00000265689 CMA1P23946 247 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 HOXA10P31260 410 aaPredicted RBP19.49■□□□□ 0.71
CHKA-201ENST00000265689 FUT2Q10981 343 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 ZNF830Q96NB3 372 aaPredicted RBP19.49■□□□□ 0.71
CHKA-201ENST00000265689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.49■□□□□ 0.71
CHKA-201ENST00000265689 C6orf229H3BNL8 230 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 PFKFB1P16118 471 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 BAG6P46379 1132 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 GSTO1P78417 241 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 PDE4BQ07343 736 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 NR5A1Q13285 461 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 STX1AQ16623 288 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 OXER1Q8TDS5 423 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 SHISA4Q96DD7 197 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
CHKA-201ENST00000265689 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
CHKA-201ENST00000265689 ZNF202O95125 648 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 PKN1Q16512 942 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 C12orf60Q5U649 245 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 LAMB1P07942 1786 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 TSPY2A6NKD2 308 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
CHKA-201ENST00000265689 PPP6R2O75170 966 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 ZBTB7AO95365 584 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 TOB1P50616 345 aaPredicted RBP19.48■□□□□ 0.71
CHKA-201ENST00000265689 AKAP17AQ02040 695 aaKnown RBP19.48■□□□□ 0.71
CHKA-201ENST00000265689 TGFBRAP1Q8WUH2 860 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 CLIC6Q96NY7 704 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 CRAMP1Q96RY5 1269 aa19.48■□□□□ 0.71
CHKA-201ENST00000265689 V9GY48 417 aaPredicted RBP19.48■□□□□ 0.71
CHKA-201ENST00000265689 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 IL1R1P14778 569 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 FBXW7Q969H0 707 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 MXD3Q9BW11 206 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 FOXP1Q9H334 677 aaPredicted RBP19.47■□□□□ 0.71
CHKA-201ENST00000265689 SLX4Q8IY92 1834 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 KLRG2A4D1S0 409 aaPredicted RBP19.47■□□□□ 0.71
CHKA-201ENST00000265689 DDAH1O94760 285 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 BAG3O95817 575 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 PPP4CP60510 307 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 SHC4Q6S5L8 630 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 RBM28Q9NW13 759 aaKnown RBP19.47■□□□□ 0.71
CHKA-201ENST00000265689 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 VPS54Q9P1Q0 977 aa19.47■□□□□ 0.71
CHKA-201ENST00000265689 RGPD3A6NKT7 1758 aaPredicted RBP19.46■□□□□ 0.71
CHKA-201ENST00000265689 RGPD4Q7Z3J3 1758 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 CALM1P0DP23 149 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 CALM2P0DP24 149 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 CALM3P0DP25 149 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 JMYQ8N9B5 988 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 NOL10Q9BSC4 688 aaKnown RBP19.46■□□□□ 0.71
CHKA-201ENST00000265689 RTFDC1Q9BY42 306 aaPredicted RBP19.46■□□□□ 0.71
CHKA-201ENST00000265689 PRPF3O43395 683 aaKnown RBP19.46■□□□□ 0.71
CHKA-201ENST00000265689 ZNF500O60304 480 aaPredicted RBP19.46■□□□□ 0.71
CHKA-201ENST00000265689 LDHCP07864 332 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 IQCB1Q15051 598 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 TMTC3Q6ZXV5 915 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 SPC24Q8NBT2 197 aa19.46■□□□□ 0.71
CHKA-201ENST00000265689 DLEC1Q9Y238 1755 aa19.45■□□□□ 0.7
CHKA-201ENST00000265689 CAVIN2O95810 425 aa19.45■□□□□ 0.7
CHKA-201ENST00000265689 DOK7Q18PE1 504 aa19.45■□□□□ 0.7
CHKA-201ENST00000265689 RCSD1Q6JBY9 416 aa19.45■□□□□ 0.7
CHKA-201ENST00000265689 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms