RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 PES1O00541 588 aaKnown RBP18.58■□□□□ 0.57
CTCF-201ENST00000264010 SOGA3Q5TF21 947 aa18.58■□□□□ 0.57
CTCF-201ENST00000264010 SALL1Q9NSC2 1324 aa18.58■□□□□ 0.56
CTCF-201ENST00000264010 CCDC194A0A1B0GVG4 234 aa18.58■□□□□ 0.56
CTCF-201ENST00000264010 CDC25BP30305 580 aa18.58■□□□□ 0.56
CTCF-201ENST00000264010 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
CTCF-201ENST00000264010 TRMT1Q9NXH9 659 aaKnown RBP18.58■□□□□ 0.56
CTCF-201ENST00000264010 PYCARDQ9ULZ3 195 aa18.58■□□□□ 0.56
CTCF-201ENST00000264010 C6orf229H3BNL8 230 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 TSPY3P0CV98 308 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 TSPY8P0CW00 308 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 KIAA1524Q8TCG1 905 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
CTCF-201ENST00000264010 ARPP21Q9UBL0 812 aaPredicted RBP18.57■□□□□ 0.56
CTCF-201ENST00000264010 PRDM4Q9UKN5 801 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 KIF28PB7ZC32 967 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 MMP1P03956 469 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 CALML3P27482 149 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 CRACR2BQ8N4Y2 399 aaPredicted RBP18.57■□□□□ 0.56
CTCF-201ENST00000264010 CLIC6Q96NY7 704 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 PYM1Q9BRP8 204 aaKnown RBP18.57■□□□□ 0.56
CTCF-201ENST00000264010 RNF26Q9BY78 433 aaPredicted RBP18.57■□□□□ 0.56
CTCF-201ENST00000264010 ATP8A2Q9NTI2 1148 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 TCRBV5S4A2TA0A5A2 114 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 BRIP1Q9BX63 1249 aa18.57■□□□□ 0.56
CTCF-201ENST00000264010 DMTNQ08495 405 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 VPS54Q9P1Q0 977 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 A0A087WWV3 80 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 KLHL10Q6JEL2 608 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 RGS22Q8NE09 1264 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 STX8Q9UNK0 236 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 PAXBP1Q9Y5B6 917 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 POLR2DO15514 142 aaKnown RBP18.56■□□□□ 0.56
CTCF-201ENST00000264010 RCAN1P53805 252 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 LRMPQ12912 555 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 NRBP1Q9UHY1 535 aa18.56■□□□□ 0.56
CTCF-201ENST00000264010 DHX58Q96C10 678 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 SARM1Q6SZW1 724 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 MYRIPQ8NFW9 859 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 KIF18AQ8NI77 898 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 IMPACTQ9P2X3 320 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 TCHHQ07283 1943 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 TULP1O00294 542 aaPredicted RBP18.55■□□□□ 0.56
CTCF-201ENST00000264010 TSR1Q2NL82 804 aaKnown RBP18.55■□□□□ 0.56
CTCF-201ENST00000264010 DPCR1Q3MIW9 517 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 CEP135Q66GS9 1140 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 PPFIBP1Q86W92 1011 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 PNOCQ13519 176 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 FAM47AQ5JRC9 791 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 FAM84BQ96KN1 310 aaPredicted RBP18.55■□□□□ 0.56
CTCF-201ENST00000264010 SENP2Q9HC62 589 aa18.55■□□□□ 0.56
CTCF-201ENST00000264010 hCG_1642624A0A1W2PR95 340 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 DDAH1O94760 285 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 KRBA2Q6ZNG9 492 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 ENGASEQ8NFI3 743 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 AFMP43652 599 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 FANCCQ00597 558 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
CTCF-201ENST00000264010 HSP90B2PQ58FF3 399 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 PLA2G4DQ86XP0 818 aa18.54■□□□□ 0.56
CTCF-201ENST00000264010 CYP2D7A0A087X1C5 515 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 PLCG2P16885 1265 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 MECOMQ03112 1051 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
CTCF-201ENST00000264010 RAD21O60216 631 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 ZNF174Q15697 407 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 RC3H1Q5TC82 1133 aaKnown RBP18.53■□□□□ 0.56
CTCF-201ENST00000264010 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 POSTNQ15063 836 aa18.53■□□□□ 0.56
CTCF-201ENST00000264010 XPO4Q9C0E2 1151 aaKnown RBP18.53■□□□□ 0.56
CTCF-201ENST00000264010 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 UFL1O94874 794 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 VPS72Q15906 364 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 CCDC12Q8WUD4 166 aaPredicted RBP18.52■□□□□ 0.56
CTCF-201ENST00000264010 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
CTCF-201ENST00000264010 LEMD3Q9Y2U8 911 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 TFAP4Q01664 338 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 STIM1Q13586 685 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 IQCB1Q15051 598 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
CTCF-201ENST00000264010 SRRTQ9BXP5 876 aaKnown RBP18.52■□□□□ 0.56
CTCF-201ENST00000264010 CNTNAP4Q9C0A0 1308 aa18.52■□□□□ 0.55
CTCF-201ENST00000264010 TTC38Q5R3I4 469 aa18.52■□□□□ 0.55
CTCF-201ENST00000264010 FERMT2Q96AC1 680 aa18.52■□□□□ 0.55
CTCF-201ENST00000264010 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 FOXP2O15409 715 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 NR5A1Q13285 461 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 SPEF2Q9C093 1822 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 FAM182BQ5T319 152 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 LRRC8AQ8IWT6 810 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 KRT222Q8N1A0 295 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 SERTAD1Q9UHV2 236 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 GGA1Q9UJY5 639 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 ZSCAN12O43309 604 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 TMED8Q6PL24 325 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms