RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
VAMP7-201ENST00000262640 ENTPD3O75355 529 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 CDKL5O76039 1030 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 TSPY3P0CV98 308 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 TSPY8P0CW00 308 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
VAMP7-201ENST00000262640 EIF6P56537 245 aaKnown RBP15.21■□□□□ 0.03
VAMP7-201ENST00000262640 GABPAQ06546 454 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 ZNF654Q8IZM8 581 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 EHD4Q9H223 541 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 FAM198AQ9UFP1 575 aa15.21■□□□□ 0.03
VAMP7-201ENST00000262640 FZD9O00144 591 aa15.21■□□□□ 0.02
VAMP7-201ENST00000262640 DTNBO60941 627 aa15.21■□□□□ 0.02
VAMP7-201ENST00000262640 MCM4P33991 863 aa15.21■□□□□ 0.02
VAMP7-201ENST00000262640 DDX11Q96FC9 970 aa15.21■□□□□ 0.02
VAMP7-201ENST00000262640 SERPINB13Q9UIV8 391 aa15.21■□□□□ 0.02
VAMP7-201ENST00000262640 PRELPP51888 382 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 CACNB3P54284 484 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 PPP2R5BQ15173 497 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 CATIPQ7Z7H3 387 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 MYL10Q9BUA6 226 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 MTMR6Q9Y217 621 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
VAMP7-201ENST00000262640 CCDC196A0A1B0GTZ2 297 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 CALM1P0DP23 149 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 CALM2P0DP24 149 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 CALM3P0DP25 149 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 RXRAP19793 462 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 DGKHQ86XP1 1220 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 ANKS1AQ92625 1134 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 SYT17Q9BSW7 474 aa15.2■□□□□ 0.02
VAMP7-201ENST00000262640 NMT2O60551 498 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 DDAH1O94760 285 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 CDC27P30260 824 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 TCP10Q12799 353 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 RTN1Q16799 776 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 FOXD4L5Q5VV16 416 aaPredicted RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 FOXD4L4Q8WXT5 416 aaPredicted RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 DDX11L8A8MPP1 907 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 ADD1P35611 737 aaKnown RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 ZFPM1Q8IX07 1006 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
VAMP7-201ENST00000262640 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 ZNF70Q9UC06 446 aaPredicted RBP15.19■□□□□ 0.02
VAMP7-201ENST00000262640 F13A1P00488 732 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 LMNB1P20700 586 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 ZNF280AP59817 542 aaPredicted RBP15.18■□□□□ 0.02
VAMP7-201ENST00000262640 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 RCSD1Q6JBY9 416 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 FANCBQ8NB91 859 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 ZBED3Q96IU2 234 aaPredicted RBP15.18■□□□□ 0.02
VAMP7-201ENST00000262640 PI4KBQ9UBF8 816 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 ATRNL1Q5VV63 1379 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 FKBP1CQ5VVH2 108 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 DPF2Q92785 391 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 ANP32EQ9BTT0 268 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 ORC3Q9UBD5 711 aaPredicted RBP15.18■□□□□ 0.02
VAMP7-201ENST00000262640 ATP6V1DQ9Y5K8 247 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 PLIN4Q96Q06 1357 aa15.18■□□□□ 0.02
VAMP7-201ENST00000262640 GOLGB1Q14789 3259 aaKnown RBP15.18■□□□□ 0.02
VAMP7-201ENST00000262640 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 MYO1BO43795 1136 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
VAMP7-201ENST00000262640 NTRK3Q16288 839 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 ZSCAN29Q8IWY8 852 aaPredicted RBP15.17■□□□□ 0.02
VAMP7-201ENST00000262640 KAT14Q9H8E8 782 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 MYOZ2Q9NPC6 264 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
VAMP7-201ENST00000262640 H3BQV1 296 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 IFNAR1P17181 557 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 PTMSP20962 102 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 TROAPQ12815 778 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 IFFO2Q5TF58 517 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 SH3BP5LQ7L8J4 393 aa15.17■□□□□ 0.02
VAMP7-201ENST00000262640 FOXP4Q8IVH2 680 aaPredicted RBP15.17■□□□□ 0.02
VAMP7-201ENST00000262640 CRACR2BQ8N4Y2 399 aaPredicted RBP15.17■□□□□ 0.02
VAMP7-201ENST00000262640 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
VAMP7-201ENST00000262640 SHMT1P34896 483 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 GMPSP49915 693 aaPredicted RBP15.16■□□□□ 0.02
VAMP7-201ENST00000262640 GJA3Q9Y6H8 435 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 STK36Q9NRP7 1315 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 CLRN2A0PK11 232 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 CDC37L1Q7L3B6 337 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 RGS22Q8NE09 1264 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 TRIM34Q9BYJ4 488 aa15.16■□□□□ 0.02
VAMP7-201ENST00000262640 TCP10L2B9ZVM9 353 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
VAMP7-201ENST00000262640 METTL16Q86W50 562 aaKnown RBP15.15■□□□□ 0.02
VAMP7-201ENST00000262640 FAM151AQ8WW52 585 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 CCDC17Q96LX7 622 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 MAP3K14Q99558 947 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 ZNF541Q9H0D2 1346 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 WNT10BO00744 389 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms