RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ORC4O43929 436 aa32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 NMT2O60551 498 aa32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 RRP1BQ14684 758 aaKnown RBP32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 DHX32Q7L7V1 743 aaKnown RBP32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 CNNM2Q9H8M5 875 aa32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 PDRG1Q9NUG6 133 aa32.42■■■□□ 2.78
SMARCD3-201ENST00000262188 EXOSC10Q01780 885 aaKnown RBP32.41■■■□□ 2.78
SMARCD3-201ENST00000262188 MAP1SQ66K74 1059 aaPredicted RBP32.41■■■□□ 2.78
SMARCD3-201ENST00000262188 SULF1Q8IWU6 871 aa32.41■■■□□ 2.78
SMARCD3-201ENST00000262188 TTC14Q96N46 770 aa32.41■■■□□ 2.78
SMARCD3-201ENST00000262188 TRIM34Q9BYJ4 488 aa32.41■■■□□ 2.78
SMARCD3-201ENST00000262188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.41■■■□□ 2.78
SMARCD3-201ENST00000262188 TFAP4Q01664 338 aa32.4■■■□□ 2.78
SMARCD3-201ENST00000262188 FOXP4Q8IVH2 680 aaPredicted RBP32.4■■■□□ 2.78
SMARCD3-201ENST00000262188 ESR2Q92731 530 aa32.4■■■□□ 2.78
SMARCD3-201ENST00000262188 AKR1B1P15121 316 aa32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 MCM5P33992 734 aa32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 HSP90AA2PQ14568 343 aaPredicted RBP32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 ZC3H15Q8WU90 426 aaKnown RBP32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 SENP2Q9HC62 589 aa32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 AK2P54819 239 aa32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 FMR1Q06787 632 aaKnown RBP eCLIP32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 Q6ZUG5 572 aa32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 METTL16Q86W50 562 aaKnown RBP32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 ZNF444Q8N0Y2 327 aaPredicted RBP32.39■■■□□ 2.78
SMARCD3-201ENST00000262188 TSPY2A6NKD2 308 aa32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 GDF11O95390 407 aa32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 JAG1P78504 1218 aa32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 SSC5DA1L4H1 1573 aa32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 HMGB1P09429 215 aaKnown RBP32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 PRKG1Q13976 671 aa32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 SWAP70Q9UH65 585 aa32.38■■■□□ 2.77
SMARCD3-201ENST00000262188 MYH8P13535 1937 aa32.37■■■□□ 2.77
SMARCD3-201ENST00000262188 PCP11498 1178 aaKnown RBP32.37■■■□□ 2.77
SMARCD3-201ENST00000262188 CLEC10AQ8IUN9 316 aa32.37■■■□□ 2.77
SMARCD3-201ENST00000262188 TOB2Q14106 344 aaPredicted RBP32.36■■■□□ 2.77
SMARCD3-201ENST00000262188 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.36■■■□□ 2.77
SMARCD3-201ENST00000262188 TRAF5O00463 557 aa32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 TSPY3P0CV98 308 aa32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 TSPY8P0CW00 308 aa32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 TATDN1Q6P1N9 297 aa32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 IL17RBQ9NRM6 502 aa32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 HERC5Q9UII4 1024 aaKnown RBP32.35■■■□□ 2.77
SMARCD3-201ENST00000262188 MPHOSPH10O00566 681 aaKnown RBP32.34■■■□□ 2.77
SMARCD3-201ENST00000262188 CERKLQ49MI3 558 aaPredicted RBP32.34■■■□□ 2.77
SMARCD3-201ENST00000262188 ZNF287Q9HBT7 754 aa32.34■■■□□ 2.77
SMARCD3-201ENST00000262188 FGD1P98174 961 aa32.34■■■□□ 2.77
SMARCD3-201ENST00000262188 BRF1Q92994 677 aa32.34■■■□□ 2.77
SMARCD3-201ENST00000262188 PPP2R3BQ9Y5P8 575 aa32.34■■■□□ 2.77
SMARCD3-201ENST00000262188 IFIT3O14879 490 aaKnown RBP32.33■■■□□ 2.77
SMARCD3-201ENST00000262188 ST18O60284 1047 aa32.33■■■□□ 2.77
SMARCD3-201ENST00000262188 IGDCC4Q8TDY8 1250 aa32.33■■■□□ 2.77
SMARCD3-201ENST00000262188 NFKBIBQ15653 356 aa32.32■■■□□ 2.77
SMARCD3-201ENST00000262188 TMEM67Q5HYA8 995 aa32.32■■■□□ 2.77
SMARCD3-201ENST00000262188 CDCA5Q96FF9 252 aa32.32■■■□□ 2.77
SMARCD3-201ENST00000262188 TNKSO95271 1327 aa32.32■■■□□ 2.76
SMARCD3-201ENST00000262188 SH2B2O14492 632 aaPredicted RBP32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 TBC1D12O60347 775 aa32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 MAP3K10Q02779 954 aa32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 APOBRQ0VD83 1088 aa32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 CDC37L1Q7L3B6 337 aa32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 RAB11FIP4Q86YS3 637 aa32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 ZSCAN10Q96SZ4 725 aaPredicted RBP32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 UBAC1Q9BSL1 405 aa32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 GPBP1L1Q9HC44 474 aaPredicted RBP32.31■■■□□ 2.76
SMARCD3-201ENST00000262188 ENAHQ8N8S7 591 aaPredicted RBP32.3■■■□□ 2.76
SMARCD3-201ENST00000262188 TBC1D2Q9BYX2 928 aa32.3■■■□□ 2.76
SMARCD3-201ENST00000262188 PHF20L1A8MW92 1017 aa32.3■■■□□ 2.76
SMARCD3-201ENST00000262188 LDHDQ86WU2 507 aa32.3■■■□□ 2.76
SMARCD3-201ENST00000262188 NEDD1Q8NHV4 660 aa32.3■■■□□ 2.76
SMARCD3-201ENST00000262188 LY9Q9HBG7 655 aa32.3■■■□□ 2.76
SMARCD3-201ENST00000262188 LARGE1O95461 756 aa32.29■■■□□ 2.76
SMARCD3-201ENST00000262188 SLC4A3P48751 1232 aa32.29■■■□□ 2.76
SMARCD3-201ENST00000262188 CEP95Q96GE4 821 aa32.29■■■□□ 2.76
SMARCD3-201ENST00000262188 TPCN1Q9ULQ1 816 aa32.29■■■□□ 2.76
SMARCD3-201ENST00000262188 GH2P01242 217 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 SEC23AQ15436 765 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 CCDC84Q86UT8 332 aaPredicted RBP32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 IQCA1Q86XH1 822 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 INPP5BP32019 993 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 ABCB5Q2M3G0 1257 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 MOB2Q70IA6 237 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 CHMP4CQ96CF2 233 aa32.28■■■□□ 2.76
SMARCD3-201ENST00000262188 DTNBO60941 627 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 GUCY1A2P33402 732 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 SEPT2Q15019 361 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 RCSD1Q6JBY9 416 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 NAP1L2Q9ULW6 460 aaPredicted RBP32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 ANGEL1Q9UNK9 670 aaKnown RBP32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 HSP90AA1P07900 732 aaKnown RBP32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 SUPT20HL1Q3ZLR7 823 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 WDR19Q8NEZ3 1342 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 TMEM87BQ96K49 555 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 AGXT2Q9BYV1 514 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 ZNF408Q9H9D4 720 aa32.27■■■□□ 2.76
SMARCD3-201ENST00000262188 WTAPQ15007 396 aa32.26■■■□□ 2.75
SMARCD3-201ENST00000262188 RAB3GAP1Q15042 981 aa32.26■■■□□ 2.75
SMARCD3-201ENST00000262188 MYL10Q9BUA6 226 aa32.26■■■□□ 2.75
SMARCD3-201ENST00000262188 ZKSCAN4Q969J2 545 aaPredicted RBP32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms